| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is pheT [H]
Identifier: 29141683
GI number: 29141683
Start: 1285120
End: 1287507
Strand: Direct
Name: pheT [H]
Synonym: t1219
Alternate gene names: 29141683
Gene position: 1285120-1287507 (Clockwise)
Preceding gene: 29141682
Following gene: 29141684
Centisome position: 26.82
GC content: 53.43
Gene sequence:
>2388_bases ATGAAATTCAGCGAACTGTGGTTACGCGAGTGGGTTAACCCGGCAATTGATAGCGATGCGTTGGCTAACCAGATTACGAT GGCTGGCCTGGAAGTAGACGGCGTTGAGCCGGTCGCGGGAAGCTTCAATGGCGTTGTGGTTGGGGAAGTGGTTGAGTGCG CCCAGCATCCGAACGCTGACAAATTGCGTGTAACGAAAGTCAACGTCGGCGGAGAACGCCTGTTGGATATCGTCTGCGGC GCGCCAAACTGTCGTCAGGGGCTGAAAGTAGCGGTGGCCACTATTGGCGCTATTCTGCCGGGCGATTTCAAAATTAAAGC GGCGAAACTGCGCGGCGAACCGTCTGAAGGGATGCTGTGCTCCTTCTCCGAACTGGGGATTTCCGACGATCACAGCGGCA TTATCGAACTGCCGGCGGATGCGCCGTTGGGTACCGACATCCGTGAATACCTGAAGCTTGACGACAATACCATCGAAATT AGCGTCACGCCGAACCGTGCGGATTGCTTAGGTATCATCGGCGTTGCGCGTGATGTGGCGGTACTGAACAAAGCGCCGCT CCAGGAGCCTGAAATGGCGCCGGTTACGGCAACCATCAGCGATACGCTGCTGATTACGGTAGAGGCTGTTGATGCGTGTC CTCGCTATCTTGGCCGGGTGGTAAAAGGTATCAATGTTAACGCGCCGACGCCGCTGTGGATGAAAGAGAAACTGCGTCGC TGCGGTATTCGCTCCATCGATGCGGTGGTTGACGTCACGAACTATGTGCTGCTCGAACTGGGTCAGCCAATGCATGCTTT CGATAAAGATCGCATTGATGGCGGTATTGTCGTGCGGATGGCAAAAGAGGGTGAAACCGTCGTCCTGCTGGACGGTAGCG AAGCGACGTTAAATGCGGACACGCTGGTGATCGCCGATCACCATAAGGCGCTGGGGATAGCCGGTATTTTTGGCGGCGAA CATTCCGGCGTGAACGGCGAAACGCAAAATGTGCTGCTGGAGTGTGCGTACTTTAATCCGCTGTCTATCACCGGTCGCGC TCGCCGCCACGGTCTGCATACCGATGCGTCTCACCGCTACGAGCGCGGGGTGGACCCGGCGCTGCAATATAAAACGATAG AGCGCGCTACTCGTCTGCTTCTTGATATCTGTGGCGGTGATGCGGGTCCGATAATTGATGTGAGCAACGAAGCAACGTTG CCGAAACGCGCCACCATTACTCTGCGTCGCAGTAAACTGGATCGCCTGATCGGGCATCATATTGCGGATGAGCAGGTCAG TGATATTCTGCGTCGTCTGGGCTGTGAAGTGACCGAAGGGCAGGACGAGTGGAAAGCCGTGGCGCCGACCTGGCGTTTCG ATATGGAGATTGAAGAAGATCTGGTGGAAGAGGTGGCCCGCGTTTACGGCTATAACAATATTCCGGACGAGCCAATCCAG GCCGGTTTAATCATGGGAACGCACCGTGAAGCCGATCTGTCGTTGAAGCGGGTTAAAACCATGCTGAACGACAAAGGCTA TCAGGAAGTGATTACCTATAGCTTTGTCGATCCTAAAGTACAACAGCTCATCCATCCAGGCGCAGAAGCGCTGCTGCTGC CAAACCCTATCTCCGTTGAGATGTCGGCGATGCGTCTGTCTCTGTGGAGCGGATTGTTGGCGACGGTGGTCTATAACCAA AACCGTCAGCAGAATCGCGTGCGTATTTTTGAAACCGGTTTACGTTTCGTTCCGGATACACAAGCCAATCTGGGTATTCG ACAGGATCTGATGCTGGCTGGCGTGATTTGCGGTAACCGCTATGATGAGCACTGGAACCTGGCAAAAGAGACCGTTGATT TCTATGATTTGAAAGGCGATCTGGAAGCAGTATTGGATTTAACCGGCAAACTGGGTGATATCCAGTTTAAGGCGGAGATG AATCCGGCTCTGCATCCGGGACAGTCTGCGGCGATTTATCTGAAAGATGAACGTATTGGTTTTATTGGGGTTGTTCACCC TGAACTGGAACGTAAACTGGATCTGAATGGTCGTACGCTGGTGTTTGAACTGGAATGGAATAAGCTCGCAGACCGTATCG TGCCGCAGGCGCGGGAGATTTCACGCTTCCCGGCCAACCGTCGCGATATTGCGGTTGTTGTTGCAGAAAACGTTCCCGCA GCGGATATTTTATCCGAATGTAAGAAAGTTGGCGTAAATCAGGTAGTTGGCGTAAACTTATTTGACGTGTACCGCGGTAA GGGTGTTGCGGAGGGTTATAAAAGCCTCGCTATCAGCCTGATCCTTCAGGATACCAACCGTACACTCGAAGAAGAGGAGA TTGCCGCTACCGTCGCCAAATGTGTAGAGGCATTAAAAGAGCGATTCCAGGCATCATTGAGGGATTGA
Upstream 100 bases:
>100_bases ACGTCTGACCATGTTGCGTTACGGCGTCACCGACCTGCGTTCATTCTTCGAAAACGATCTGCGTTTCCTTAAACAGTTTA AATAAAGGCAGGATAAAACA
Downstream 100 bases:
>100_bases ACCTATGGCGCTTACAAAAGCTGAAATGTCAGAATATCTGTTTGATAAGCTTGGGCTTAGCAAGCGGGATGCCAAAGAAC TGGTTGAACTGTTTTTCGAA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNADKLRVTKVNVGGERLLDIVCG APNCRQGLKVAVATIGAILPGDFKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEI SVTPNRADCLGIIGVARDVAVLNKAPLQEPEMAPVTATISDTLLITVEAVDACPRYLGRVVKGINVNAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNADTLVIADHHKALGIAGIFGGE HSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATL PKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQ AGLIMGTHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQ NRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEHWNLAKETVDFYDLKGDLEAVLDLTGKLGDIQFKAEM NPALHPGQSAAIYLKDERIGFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAREISRFPANRRDIAVVVAENVPA ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLRD
Sequences:
>Translated_795_residues MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNADKLRVTKVNVGGERLLDIVCG APNCRQGLKVAVATIGAILPGDFKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEI SVTPNRADCLGIIGVARDVAVLNKAPLQEPEMAPVTATISDTLLITVEAVDACPRYLGRVVKGINVNAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNADTLVIADHHKALGIAGIFGGE HSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATL PKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQ AGLIMGTHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQ NRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEHWNLAKETVDFYDLKGDLEAVLDLTGKLGDIQFKAEM NPALHPGQSAAIYLKDERIGFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAREISRFPANRRDIAVVVAENVPA ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLRD >Mature_795_residues MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNADKLRVTKVNVGGERLLDIVCG APNCRQGLKVAVATIGAILPGDFKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEI SVTPNRADCLGIIGVARDVAVLNKAPLQEPEMAPVTATISDTLLITVEAVDACPRYLGRVVKGINVNAPTPLWMKEKLRR CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNADTLVIADHHKALGIAGIFGGE HSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATL PKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQ AGLIMGTHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQ NRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEHWNLAKETVDFYDLKGDLEAVLDLTGKLGDIQFKAEM NPALHPGQSAAIYLKDERIGFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAREISRFPANRRDIAVVVAENVPA ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLRD
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=795, Percent_Identity=92.3270440251572, Blast_Score=1479, Evalue=0.0, Organism=Drosophila melanogaster, GI21355211, Length=393, Percent_Identity=24.6819338422392, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 87328; Mature: 87328
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD CCHHHHHHHHHCCCCCCCHHHHHHHEEECEEECCCCCCCCCCCCEEHHHHHHHHCCCCCC KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILPGDFKIKAAKLRGEPSEGMLC CEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEE SFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA EHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH VLNKAPLQEPEMAPVTATISDTLLITVEAVDACPRYLGRVVKGINVNAPTPLWMKEKLRR HHCCCCCCCCCCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNAD CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCEECCC TLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRY EEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCHHHHCCCCCCCHHHH ERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLIGHH HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHH IADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQ CCHHHHHHHHHHHCCEECCCCHHHEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCC AGLIMGTHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVE CCEEEECCCCCCHHHHHHHHHHCCCCCHHHHEEECCCHHHHHHHCCCCCEEECCCCCCEE MSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNR HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC YDEHWNLAKETVDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERIG CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCEE FIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAREISRFPANRRDIAVVVAENVPA EEEEECHHHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCH ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAK HHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHH CVEALKERFQASLRD HHHHHHHHHHHHCCC >Mature Secondary Structure MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD CCHHHHHHHHHCCCCCCCHHHHHHHEEECEEECCCCCCCCCCCCEEHHHHHHHHCCCCCC KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILPGDFKIKAAKLRGEPSEGMLC CEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEE SFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVA EHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHH VLNKAPLQEPEMAPVTATISDTLLITVEAVDACPRYLGRVVKGINVNAPTPLWMKEKLRR HHCCCCCCCCCCCCEEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH CGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNAD CCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCEECCC TLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRY EEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCHHHHCCCCCCCHHHH ERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLIGHH HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHH IADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQ CCHHHHHHHHHHHCCEECCCCHHHEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCC AGLIMGTHREADLSLKRVKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVE CCEEEECCCCCCHHHHHHHHHHCCCCCHHHHEEECCCHHHHHHHCCCCCEEECCCCCCEE MSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNR HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC YDEHWNLAKETVDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERIG CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCEE FIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAREISRFPANRRDIAVVVAENVPA EEEEECHHHHHHCCCCCCEEEEEECHHHHHHHHCCCHHHHHHCCCCCCCEEEEEECCCCH ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAK HHHHHHHHHCCCCCEECCCHHHHHCCCCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHH CVEALKERFQASLRD HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]