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The map label for this gene is ydiY [H]

Identifier: 29141672

GI number: 29141672

Start: 1274753

End: 1275511

Strand: Direct

Name: ydiY [H]

Synonym: t1207

Alternate gene names: 29141672

Gene position: 1274753-1275511 (Clockwise)

Preceding gene: 29141668

Following gene: 29141674

Centisome position: 26.6

GC content: 50.33

Gene sequence:

>759_bases
ATGAAGCTTTTGAAGGCAGTACCCGCTGTAGTTATGCTGGCGGGTGGCGTGTTCGCGTCTCTGTATGCCGCCGCCGATGA
TTCCGTTTTTACTGTCATGGATGATCCCTCCACCGCGAAAAAACCTTTTGAAGGTAATCTGAATGCGGGCTACCTTGCTC
AGTCAGGCAATACTAAAAGTTCTTCCTTAACGGCTGACACGGCGATGACCTGGTATGGACAACGTACCGCCTGGTCATTA
TGGGGCAATGCCAGCAATACCTCCTCTAATGATGAACGCTCTTCAGAAAAATATGCGGTAGGCGTGCGTAACCGTTTTAA
TATGACGGATTATGATTATACCTTTGGCCAGGCCAGTTGGCTGACAGACCGTTTCAACGGTTATCGTCAGCGCGACGTAC
TGACCGCCGGTTACGGGCGGCAGTTCCTTAATGGTCCAGTGCACAGCTTCCGTTTTGAATTCGGTCCAGGGGTTCGCTAT
GACGAACATACGGACGATACCACTGAAACGCAGCCGTTGGGTTATGCTTCCGGCAGCTATGCCTGGCAGTTAACTGACAA
TGCTAAGTTTACACAGGGGGTGTCAGTATTTGGCGCAGAAGACACCACACTAAATTCGGAAACAGCCCTCAATGTCGCCA
TTAACGAACATTTTGGTCTAAAGGTGGGGTATAATTTAACGTGGAACTCGCAGCCGCCTGAATCAGCGCCTGAACATACC
GATCGCCGCACTACGGTAACGCTGGGCTATAAGATGTAA

Upstream 100 bases:

>100_bases
CTTATAATTCGCTACCTTTCCAGGGGCGTTTGTCATTGATCCCTATGAAAGTTTCCGGGACCGTCGTGGTCTCTTTTTTA
GTTGTACGGACTCTATATAA

Downstream 100 bases:

>100_bases
TATTGCGCCGGGTTACGTTACGTAACCCGGTTATTCCGTGGTGACGCCTCAGAAGAAGAAGGTGATGTCGCCGTTGATAT
AAGAATAGTCGTCTCCGGTG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSL
WGNASNTSSNDERSSEKYAVGVRNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DEHTDDTTETQPLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHT
DRRTTVTLGYKM

Sequences:

>Translated_252_residues
MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSL
WGNASNTSSNDERSSEKYAVGVRNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DEHTDDTTETQPLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHT
DRRTTVTLGYKM
>Mature_252_residues
MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSL
WGNASNTSSNDERSSEKYAVGVRNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
DEHTDDTTETQPLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHT
DRRTTVTLGYKM

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=88.4920634920635, Blast_Score=472, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27803; Mature: 27803

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
SSLTADTAMTWYGQRTAWSLWGNASNTSSNDERSSEKYAVGVRNRFNMTDYDYTFGQASW
CCEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHH
LTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQPLGYASGSY
HHHHHCCCCHHCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
AWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTTVTLGYKM
CCCEEEEEEEEC
>Mature Secondary Structure
MKLLKAVPAVVMLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKS
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
SSLTADTAMTWYGQRTAWSLWGNASNTSSNDERSSEKYAVGVRNRFNMTDYDYTFGQASW
CCEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHH
LTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQPLGYASGSY
HHHHHCCCCHHCEEECCCCHHHHCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
AWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHT
EEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
DRRTTVTLGYKM
CCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]