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The map label for this gene is ychM [H]

Identifier: 29141567

GI number: 29141567

Start: 1179012

End: 1180697

Strand: Reverse

Name: ychM [H]

Synonym: t1095

Alternate gene names: 29141567

Gene position: 1180697-1179012 (Counterclockwise)

Preceding gene: 29141568

Following gene: 29141565

Centisome position: 24.64

GC content: 56.88

Gene sequence:

>1686_bases
GTGAACAAATTATTTTCCTCACATGTGATGCCTTTCCGCGCTCTCATCGATGCTTGCTGGAAAGAAAAATATACCGCCTC
CCGGTTCACCCGTGATGTGATAGCCGGGATCACCGTCGGGATTATTGCTATCCCGCTGGCGATGGCGCTGGCAATTGGCA
GTGGCGTTGCGCCGCAGTATGGCCTCTATACCTCCGCTGTCGCCGGGATCGTGATCGCGCTAACCGGCGGCTCGCGCTTT
AGCGTTTCCGGCCCTACCGCCGCGTTTGTGGTGATTTTGTATCCGGTGTCGCAACAGTTTGGTCTGGCGGGCCTACTGGT
CGCCACGCTGATGTCGGGCTTCTTCCTGATCCTTTTCGGCCTGGCGAGACTGGGGCGATTGATTGAATATATCCCGGTGT
CGGTCACGTTGGGTTTTACCTCAGGGATTGGTATTACCATCGGTACCATGCAGATTAAAGATTTTCTTGGTCTGCAGATG
GCCCATGTGCCAGAGCACTATTTGCAGAAAGTCGGCGCGCTGTTTATGGCGTTGCCCACCGTCAATATTGGCGATGCCGC
CATTGGCGTGGTAACGCTGGGAACGCTGATTTTCTGGCCGCGTCTCGGTATTCGTCTGCCGGGACACCTTCCCGCGCTGC
TGGCCGGTTGCGCCGTAATGGGGATTGTTAATCTGCTGGGCGGCAATGTGGCGACTATCGGCTCACAGTTCCATTACGTT
CTGGCTGACGGCACTCAGGGCAACGGCATCCCGCAGCTCCTGCCGCAACTGATGCTGCCGTGGAGCCTTCCTGGCTCCGA
TTTTACGCTAAGCTGGGATTCACTGCGCGCGCTGCTGCCAGCGGCTTTCTCGATGGCAATGCTGGGGGCAATCGAATCAT
TGCTCTGCGCCGTCGTGCTGGACGGCATGACCGGCACCAAACATAAAGCTAACAGCGAACTTATCGGCCAGGGGCTGGGG
AATATGGTCGCGCCGTTCTTTGGCGGCATCACCGCCACCGCCGCGATTGCCCGCTCTGCCGCCAACGTCCGCGCTGGCGC
GACCTCTCCCGTCTCGGCGGTAATTCACGCTATTCTGGTCATTCTGGCGCTACTGGTCTTAGCCCCGCTACTCTCCTGGC
TGCCGCTTTCCGCGATGGCGGCGCTACTGCTGATGGTGGCATGGAATATGAGTGAAGCCCATAAAGTGGTGGATCTGTTA
CGCCATGCGCCGAAAGATGACATTATCGTTATGCTGCTGTGCATGTCATTAACGGTTCTGTTTGATATGGTCATCGCCAT
CAGCGTGGGGATTGTCCTTGCTTCCCTGCTGTTTATGCGCCGTATTGCGCGAATGACTCGACTTGCGCCGGTCAATGTCG
ATGTGCCTGAAGATGTGCTGGTGCTGCGTGTTATCGGTCCGCTCTTTTTCGCCGCGGCGGAAGGGCTGTTTACCGACCTT
GAGTCACGTATTAAGGGCAAACGTATCGTCGTTCTGAAATGGGACGCAGTACCAGTGCTGGATGCAGGCGGGCTTGATGC
TTTTCAGCGTTTTGTGAAGCGTCTGCCGGAGGGTTGCGAATTGCGTATCAGTAACCTGGAGTTCCAACCGCTGCGCACAA
TGGCGCGTGCCGGTATCAAACCCATTCCTGGACGTCTGACCTTCTTCCCGAACAGGACGGAGGCGTTAGCGGATTTACTC
AGTTAA

Upstream 100 bases:

>100_bases
GCGGCGGGTTTTTTTGTCTGTAACACCCTTTTATATGACTTATGCCTCCTTCACCTGCCATTTAGTTGACAGATGATGCG
CTCATGGATGAAACATTATT

Downstream 100 bases:

>100_bases
TGGACAATGCCCGGTGGCGATAACGCTTACCGGGCCTGAACCGGTTAGCTATGACGACGATTGTCGCTACGGCGGCAACG
TTTGTCATAGTGACGTACCC

Product: sulfate transporter YchM

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MNKLFSSHVMPFRALIDACWKEKYTASRFTRDVIAGITVGIIAIPLAMALAIGSGVAPQYGLYTSAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGFFLILFGLARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
AHVPEHYLQKVGALFMALPTVNIGDAAIGVVTLGTLIFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGNVATIGSQFHYV
LADGTQGNGIPQLLPQLMLPWSLPGSDFTLSWDSLRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLG
NMVAPFFGGITATAAIARSAANVRAGATSPVSAVIHAILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLL
RHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVNVDVPEDVLVLRVIGPLFFAAAEGLFTDL
ESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFVKRLPEGCELRISNLEFQPLRTMARAGIKPIPGRLTFFPNRTEALADLL
S

Sequences:

>Translated_561_residues
MNKLFSSHVMPFRALIDACWKEKYTASRFTRDVIAGITVGIIAIPLAMALAIGSGVAPQYGLYTSAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGFFLILFGLARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
AHVPEHYLQKVGALFMALPTVNIGDAAIGVVTLGTLIFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGNVATIGSQFHYV
LADGTQGNGIPQLLPQLMLPWSLPGSDFTLSWDSLRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLG
NMVAPFFGGITATAAIARSAANVRAGATSPVSAVIHAILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLL
RHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVNVDVPEDVLVLRVIGPLFFAAAEGLFTDL
ESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFVKRLPEGCELRISNLEFQPLRTMARAGIKPIPGRLTFFPNRTEALADLL
S
>Mature_561_residues
MNKLFSSHVMPFRALIDACWKEKYTASRFTRDVIAGITVGIIAIPLAMALAIGSGVAPQYGLYTSAVAGIVIALTGGSRF
SVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGFFLILFGLARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
AHVPEHYLQKVGALFMALPTVNIGDAAIGVVTLGTLIFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGNVATIGSQFHYV
LADGTQGNGIPQLLPQLMLPWSLPGSDFTLSWDSLRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELIGQGLG
NMVAPFFGGITATAAIARSAANVRAGATSPVSAVIHAILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLL
RHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAPVNVDVPEDVLVLRVIGPLFFAAAEGLFTDL
ESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFVKRLPEGCELRISNLEFQPLRTMARAGIKPIPGRLTFFPNRTEALADLL
S

Specific function: Possible sulfate transporter [H]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=548, Percent_Identity=27.1897810218978, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI262206075, Length=548, Percent_Identity=27.1897810218978, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI262206069, Length=548, Percent_Identity=27.1897810218978, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI262206063, Length=548, Percent_Identity=27.1897810218978, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI4557535, Length=502, Percent_Identity=22.9083665338645, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI20336282, Length=530, Percent_Identity=21.1320754716981, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI16306483, Length=517, Percent_Identity=21.2765957446809, Blast_Score=83, Evalue=8e-16,
Organism=Homo sapiens, GI4505697, Length=532, Percent_Identity=22.1804511278195, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI94721257, Length=480, Percent_Identity=21.875, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI94721259, Length=480, Percent_Identity=21.875, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI94721255, Length=480, Percent_Identity=21.875, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI94721253, Length=480, Percent_Identity=21.875, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI47131207, Length=545, Percent_Identity=24.4036697247706, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI20336272, Length=545, Percent_Identity=24.4036697247706, Blast_Score=73, Evalue=8e-13,
Organism=Homo sapiens, GI39752683, Length=401, Percent_Identity=20.4488778054863, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI45827800, Length=401, Percent_Identity=20.4488778054863, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI100913030, Length=543, Percent_Identity=21.3627992633518, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI45827802, Length=401, Percent_Identity=20.4488778054863, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI269784651, Length=392, Percent_Identity=21.9387755102041, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87081859, Length=559, Percent_Identity=92.8443649373882, Blast_Score=977, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17566848, Length=571, Percent_Identity=24.5183887915937, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI193203292, Length=383, Percent_Identity=24.2819843342037, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86564196, Length=448, Percent_Identity=23.4375, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323121, Length=457, Percent_Identity=24.0700218818381, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319771, Length=457, Percent_Identity=22.7571115973742, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI85815873, Length=500, Percent_Identity=26, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19922482, Length=510, Percent_Identity=24.7058823529412, Blast_Score=115, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24663084, Length=443, Percent_Identity=26.410835214447, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21357695, Length=443, Percent_Identity=26.410835214447, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21358229, Length=463, Percent_Identity=25.7019438444924, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24651449, Length=445, Percent_Identity=24.0449438202247, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24649801, Length=440, Percent_Identity=26.1363636363636, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21358633, Length=430, Percent_Identity=24.6511627906977, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21355087, Length=172, Percent_Identity=29.0697674418605, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24647160, Length=172, Percent_Identity=29.0697674418605, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24666186, Length=439, Percent_Identity=24.6013667425968, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 59579; Mature: 59579

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLFSSHVMPFRALIDACWKEKYTASRFTRDVIAGITVGIIAIPLAMALAIGSGVAPQY
CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGFFLILFG
CHHHHHHHCEEEEEECCCEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQKVGALFMALPT
HHHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
VNIGDAAIGVVTLGTLIFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGNVATIGSQFHYV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEE
LADGTQGNGIPQLLPQLMLPWSLPGSDFTLSWDSLRALLPAAFSMAMLGAIESLLCAVVL
EECCCCCCCHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGMTGTKHKANSELIGQGLGNMVAPFFGGITATAAIARSAANVRAGATSPVSAVIHAILV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDMVIAISVGIVLASLLFMRRIARMTRLAPVNVDVPEDVLVLRVIGPLFFAAAEGLFTDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFVKRLPEGCELRISNLEFQPLRTMARAGIK
HHHCCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCC
PIPGRLTFFPNRTEALADLLS
CCCCCEEECCCHHHHHHHHHC
>Mature Secondary Structure
MNKLFSSHVMPFRALIDACWKEKYTASRFTRDVIAGITVGIIAIPLAMALAIGSGVAPQY
CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GLYTSAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQFGLAGLLVATLMSGFFLILFG
CHHHHHHHCEEEEEECCCEEECCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LARLGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQMAHVPEHYLQKVGALFMALPT
HHHHHHHHHHHHHEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
VNIGDAAIGVVTLGTLIFWPRLGIRLPGHLPALLAGCAVMGIVNLLGGNVATIGSQFHYV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCEEEE
LADGTQGNGIPQLLPQLMLPWSLPGSDFTLSWDSLRALLPAAFSMAMLGAIESLLCAVVL
EECCCCCCCHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGMTGTKHKANSELIGQGLGNMVAPFFGGITATAAIARSAANVRAGATSPVSAVIHAILV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILALLVLAPLLSWLPLSAMAALLLMVAWNMSEAHKVVDLLRHAPKDDIIVMLLCMSLTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FDMVIAISVGIVLASLLFMRRIARMTRLAPVNVDVPEDVLVLRVIGPLFFAAAEGLFTDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ESRIKGKRIVVLKWDAVPVLDAGGLDAFQRFVKRLPEGCELRISNLEFQPLRTMARAGIK
HHHCCCCEEEEEEECCCCEECCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCC
PIPGRLTFFPNRTEALADLLS
CCCCCEEECCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]