Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 29141549

GI number: 29141549

Start: 1155543

End: 1156841

Strand: Direct

Name: dadA [H]

Synonym: t1074

Alternate gene names: 29141549

Gene position: 1155543-1156841 (Clockwise)

Preceding gene: 29141547

Following gene: 29141550

Centisome position: 24.11

GC content: 56.66

Gene sequence:

>1299_bases
ATGCGAGTTGTCATCCTGGGGAGTGGCGTAGTTGGCGTGACCAGCGCCTGGTACTTGAGTCAGGCGGGGCATGATGTCAC
CGTCATCGATCGCGAATCCGGCCCGGCGCAAGAAACCAGCGCGGCGAATGCCGGACAAATTTCACCGGGATATGCGGCAC
CCTGGGCGGCCCCTGGCGTACCGCTGAAGGCGATAAAATGGATGTTCCAGCGCCATGCGCCGCTGGCGGTGCGTCTGGAT
GGCACCCCATTTCAACTGAAGTGGATGTGGCAAATGCTGCGTAACTGCGATACCCGGCATTATATGGAAAATAAAGGCCG
CATGGTGCGTCTGGCGGAATATAGTCGCGACTGCCTGAAAACGCTACGCGCCGCGACCGGTATCGAATATGAAGGCCGCC
AGGGGGGAACGCTACAACTCTTCCGCACCGCGCAACAGTATGAGAACGCCACCCGTGATATCGCCGTGCTGGAAGATGCC
GGGGTGCCGTATCAGCTCCTGGAAGCCAGCCGACTGGCGGAAGTTGAACCCGCTCTGGCTGAGGTTGCGCATAAATTAAC
CGGCGGGCTGCGCTTACCGAATGATGAAACCGGGGACTGTCAGCTCTTTACCCAGCGTCTGGCGCGCATGGCGGAGCAGG
CGGGCGTAACCTTTCGCTTTAATACTCCCGTGGAAAAATTACTGTACGAAAATGATCAGATTTACGGCGTGAAATGCGCC
GATGAGATCATTAAAGCAGATGCGTATGTCATGGCGTTTGGATCGTATTCGACGGCGATGCTTAAAGGCATTGTTGATAT
CCCGGTGTATCCGCTGAAAGGCTATTCATTAACCATCCCAATCGTCGAGCCAGACGGCGCGCCGGTATCGACGATTCTTG
ATGAAACCTACAAAATCGCTATTACGCGTTTTGATAAGCGTATTCGCGTGGGGGGAATGGCGGAAATCGTGGGCTTTAAT
ACCGACTTACTGCAACCGCGCCGCGAGACGCTGGAGATGGTTGTGCGCGATCTTTTTCCGCGCGGCGGTCATATTGAGCA
GGCCACATTCTGGACCGGCCTGCGCCCCATGACGCCGGACGGCACGCCGGTAGTAGGACGCACCCGTTATAAAAATCTGT
GGCTTAATACTGGACACGGCACCTTAGGCTGGACGATGGCCTGCGGTTCAGGCCAGTTGTTAAGCGATATCTTGTTGGGT
CGTACGCCAGCGATACCCTACGACGATCTGAGCGTGGCGCGATACCGTTCCGATTTTACGCCCACCCGCCCGCAACGTTT
GCATAGCGCGCATAACTGA

Upstream 100 bases:

>100_bases
AAGCACGTCACCATAAAAAAGTCATATGTTGAATAATATTTTCATCTGAGTTATCAAGATGTAATCAGAAGATTGTTCTT
TTACTATTAACGGAGTGGCT

Downstream 100 bases:

>100_bases
TAAAGGAAGTGAAATGACCCGCCCTATACAGGCCAGCCTTGATTTACAGGTAATGAAACAAAATTTGGCTATTGTGCGCC
GGGCGGCCCCGGAGGCGCGC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLD
GTPFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKTLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDA
GVPYQLLEASRLAEVEPALAEVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGVKCA
DEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIVEPDGAPVSTILDETYKIAITRFDKRIRVGGMAEIVGFN
TDLLQPRRETLEMVVRDLFPRGGHIEQATFWTGLRPMTPDGTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQLLSDILLG
RTPAIPYDDLSVARYRSDFTPTRPQRLHSAHN

Sequences:

>Translated_432_residues
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLD
GTPFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKTLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDA
GVPYQLLEASRLAEVEPALAEVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGVKCA
DEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIVEPDGAPVSTILDETYKIAITRFDKRIRVGGMAEIVGFN
TDLLQPRRETLEMVVRDLFPRGGHIEQATFWTGLRPMTPDGTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQLLSDILLG
RTPAIPYDDLSVARYRSDFTPTRPQRLHSAHN
>Mature_432_residues
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLD
GTPFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKTLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDA
GVPYQLLEASRLAEVEPALAEVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGVKCA
DEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIVEPDGAPVSTILDETYKIAITRFDKRIRVGGMAEIVGFN
TDLLQPRRETLEMVVRDLFPRGGHIEQATFWTGLRPMTPDGTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQLLSDILLG
RTPAIPYDDLSVARYRSDFTPTRPQRLHSAHN

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=432, Percent_Identity=89.8148148148148, Blast_Score=811, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 47953; Mature: 47953

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGV
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAVRLDGTPFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHH
TLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDAGVPYQLLEASRLAEVEPALA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHH
EVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGVKCA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCEEEEEHH
DEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIVEPDGAPVSTILDETYKIA
HHHHHCCEEEEEECCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCHHHHHCCHHEEE
ITRFDKRIRVGGMAEIVGFNTDLLQPRRETLEMVVRDLFPRGGHIEQATFWTGLRPMTPD
EEECCCCEECCCEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
GTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQLLSDILLGRTPAIPYDDLSVARYRSDFT
CCCCCCCCEECEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCC
PTRPQRLHSAHN
CCCHHHHHCCCC
>Mature Secondary Structure
MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGV
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLKAIKWMFQRHAPLAVRLDGTPFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHHHHHH
TLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDAGVPYQLLEASRLAEVEPALA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHH
EVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGVKCA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCCCEEEEEHH
DEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIVEPDGAPVSTILDETYKIA
HHHHHCCEEEEEECCHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCHHHHHCCHHEEE
ITRFDKRIRVGGMAEIVGFNTDLLQPRRETLEMVVRDLFPRGGHIEQATFWTGLRPMTPD
EEECCCCEECCCEEEEECCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC
GTPVVGRTRYKNLWLNTGHGTLGWTMACGSGQLLSDILLGRTPAIPYDDLSVARYRSDFT
CCCCCCCCEECEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHCCCC
PTRPQRLHSAHN
CCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA