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The map label for this gene is ycgB [H]

Identifier: 29141548

GI number: 29141548

Start: 1153688

End: 1155220

Strand: Reverse

Name: ycgB [H]

Synonym: t1073

Alternate gene names: 29141548

Gene position: 1155220-1153688 (Counterclockwise)

Preceding gene: 29141551

Following gene: 29141546

Centisome position: 24.11

GC content: 49.84

Gene sequence:

>1533_bases
ATGGCAATGATTGATTCCATGAACAAGGACACCACACGTTTGAGCGATGGCCCCGACTGGACATTTGATCTGCTGGATGT
TTATCTGGCAGAGATAGACCGCGTGGCGAAACTCTACCAACTGGATACTTACCCGCACCAAATTGAAGTCATCACTTCCG
AACAGATGATGGACGCCTACTCCAGCGTCGGGATGCCGATCAACTATCCGCACTGGTCGTTTGGCAAAAAGTTCATTGAG
ACGGAACGTCTGTATAAGCATGGTCAACAAGGACTGGCTTATGAAATTGTGATCAACTCTAATCCCTGCATTGCCTACCT
GATGGAAGAGAACACCATCACCATGCAGGCGCTGGTCATGGCGCACGCCTGTTACGGCCACAACTCCTTTTTTAAAAATA
ATTATCTCTTCCGGAGCTGGACGGATGCCAGCTCTATCGTCGATTACCTGATTTTCGCCCGGAATTACATTACCCGCTGT
GAAGAACGCTACGGAGTGGATGAAGTAGAAAAACTGCTCGACTCCTGCCACGCGCTGATGAATTACGGCGTCGATCGCTA
TAAGCGCCCGCAGAAAATCTCGTTGCAGGAAGAGAAAGCGCGACAAAAAAGCCGGGAAGAGTATCTACAAAGCCAGGTGA
ATATGCTGTGGCGCACGCTGCCAAAACGCGAGGAAGAAAAAACTGTCGCCGAAGCACGCCGCTTTCCTGCTGAACCGCAG
GAAAACCTACTCTATTTTATGGAGAAAAACGCCCCGTTGCTCGAGCCGTGGCAGCGCGAAATTCTGCGCATCGTGCGTAA
AGTCAGCCAGTATTTTTATCCGCAGAAACAGACGCAGGTCATGAACGAGGGCTGGGCGACCTTCTGGCACTACACCATCC
TGAACCATCTGTATGATGAAGGCAAAGTGACGGAACGCTTTATGCTGGAGTTTTTACACAGCCATACCAATGTCGTATTT
CAGCCGCCCTATAATAGCCCCTGGTATAGCGGAATTAACCCCTATGCGCTCGGCTTTGCCATGTTCCAGGATATCAAACG
TATTTGTCAGTCGCCCACGGATGAAGATAAATACTGGTTTCCGGATATTGCCGGTTCCGACTGGCTGGAAACGCTGCACT
TCGCCATGCGCGATTTTAAAGATGAAAGCTTTATCAGTCAGTTCCTGTCGCCAAAAGTGATGCGTGATTTCCGTTTCTTC
ACGGTACTTGATGATGACAGGCATAATTATCTGGAGATCTCCGCCATTCATAACGAAGAAGGTTATCGGGAGATTCGATC
AAAACTGTCGTCACAGTATAACCTGAGCAACCTGGAGCCGAATATTCAGGTCTGGAATGTGGATTTACGCGGCGACAGAT
CGCTGACGTTGCGTTATATCCCGCATAACCGCGCGCCGCTGGATAAAGGCCGCAAAGAGGTGCTGAAACATGTGCATCGG
TTATGGGGCTTTGATGTGATGCTGGAGCAACAAAATGAGGATGGCAGCGTAGAACTGCTGGAGCGTTGTCCGCCGCGCAT
GAACACGCTGTAA

Upstream 100 bases:

>100_bases
AAGAAAAGTTTTCACGATCAAGTCGTTTTTTAACATGGTGTTCTATGCTTGAAAGGAGGCGCTCCATACAGAGAGCGTCG
CCAACAATGAGGGTGCGCGA

Downstream 100 bases:

>100_bases
TCGAGATGCTGCCCGGTAGTGTTTGCGTCTACCGGGCATCGCGGGATTATCGTCCCTGAATCGCTAAATCGCCGGGCAGA
TTTTTCTGCATCCGATGCCA

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MAMIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYQLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIE
TERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITRC
EERYGVDEVEKLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRFPAEPQ
ENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVF
QPPYNSPWYSGINPYALGFAMFQDIKRICQSPTDEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFF
TVLDDDRHNYLEISAIHNEEGYREIRSKLSSQYNLSNLEPNIQVWNVDLRGDRSLTLRYIPHNRAPLDKGRKEVLKHVHR
LWGFDVMLEQQNEDGSVELLERCPPRMNTL

Sequences:

>Translated_510_residues
MAMIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYQLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIE
TERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITRC
EERYGVDEVEKLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRFPAEPQ
ENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVF
QPPYNSPWYSGINPYALGFAMFQDIKRICQSPTDEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFF
TVLDDDRHNYLEISAIHNEEGYREIRSKLSSQYNLSNLEPNIQVWNVDLRGDRSLTLRYIPHNRAPLDKGRKEVLKHVHR
LWGFDVMLEQQNEDGSVELLERCPPRMNTL
>Mature_509_residues
AMIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYQLDTYPHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIET
ERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITRCE
ERYGVDEVEKLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRFPAEPQE
NLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQ
PPYNSPWYSGINPYALGFAMFQDIKRICQSPTDEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFT
VLDDDRHNYLEISAIHNEEGYREIRSKLSSQYNLSNLEPNIQVWNVDLRGDRSLTLRYIPHNRAPLDKGRKEVLKHVHRL
WGFDVMLEQQNEDGSVELLERCPPRMNTL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=510, Percent_Identity=96.8627450980392, Blast_Score=1046, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60699; Mature: 60567

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYQLDTYPHQIEVITSEQMMDAY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHH
AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITRCEERYGVDEVEKLLDSCHALM
HHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRFPAEPQ
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH
ENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE
HCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCC
GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTDEDKYWF
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEC
PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCEEEEEEECCCCCEEEEEEECCCH
GYREIRSKLSSQYNLSNLEPNIQVWNVDLRGDRSLTLRYIPHNRAPLDKGRKEVLKHVHR
HHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
LWGFDVMLEQQNEDGSVELLERCPPRMNTL
HHCCCEEEECCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
AMIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYQLDTYPHQIEVITSEQMMDAY
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHH
SSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNPCIAYLMEENTITMQALVM
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHHH
AHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARNYITRCEERYGVDEVEKLLDSCHALM
HHHHHCCCCHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWRTLPKREEEKTVAEARRFPAEPQ
HCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH
ENLLYFMEKNAPLLEPWQREILRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDE
HCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCC
GKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINPYALGFAMFQDIKRICQSPTDEDKYWF
CCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEC
PDIAGSDWLETLHFAMRDFKDESFISQFLSPKVMRDFRFFTVLDDDRHNYLEISAIHNEE
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHCEEEEEEECCCCCEEEEEEECCCH
GYREIRSKLSSQYNLSNLEPNIQVWNVDLRGDRSLTLRYIPHNRAPLDKGRKEVLKHVHR
HHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
LWGFDVMLEQQNEDGSVELLERCPPRMNTL
HHCCCEEEECCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]