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The map label for this gene is yobD [H]

Identifier: 29141520

GI number: 29141520

Start: 1127793

End: 1128251

Strand: Reverse

Name: yobD [H]

Synonym: t1045

Alternate gene names: 29141520

Gene position: 1128251-1127793 (Counterclockwise)

Preceding gene: 161486809

Following gene: 29141519

Centisome position: 23.54

GC content: 45.75

Gene sequence:

>459_bases
ATGACTATCACGGACCTGGTGCTGATTCTCTTTATTGCCGCATTATTGGCTTACGCTCTCTACGATCAGTTCATCATGCC
CCGTCGCAATGGCCCCACTCTGCTTTCTATAGCCCTGCTCCGCCGCGGTCGCATAGACAGCGTTATCTTCGTTGGGCTGG
TCGCCATCCTTATTTATAACAACGTAACCAGCCACGGAGCGCAGATGACCACATGGTTATTAAGCGCGCTGGCGTTAATG
GGGTTTTATATATTCTGGATCCGCACGCCACGGATCATCTTTAAACAACGTGGCTTTTTCTTCGCCAATGTCTGGATAGA
ATATAACCGTATTAAAGAGATGAATTTATCGGAGGACGGCGTACTGGTGATGCAATTAGAACAACGACGCTTGCTTATCC
GTGTACGCAATATCGACGATCTGGAAAAAATATATAAACTTCTTATTGAAAATCAATAG

Upstream 100 bases:

>100_bases
ATTGGTATCGCCGGCTACTCCGTAGGACTGCTGGGCCAGTAAGGCTGTTGTACACTACCGGGGCCAAACGGCCCCGTTTT
TTTATTTCTCTGGAGGATAA

Downstream 100 bases:

>100_bases
CTTAAGATATAGCCTCAACTATGTTTTTCGAATTTTATTTCGAATCATAATATAGCTAAGGCTATATTTTCTATTGACCA
ATTGTTATTTAATTTAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLRRGRIDSVIFVGLVAILIYNNVTSHGAQMTTWLLSALALM
GFYIFWIRTPRIIFKQRGFFFANVWIEYNRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ

Sequences:

>Translated_152_residues
MTITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLRRGRIDSVIFVGLVAILIYNNVTSHGAQMTTWLLSALALM
GFYIFWIRTPRIIFKQRGFFFANVWIEYNRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ
>Mature_151_residues
TITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLRRGRIDSVIFVGLVAILIYNNVTSHGAQMTTWLLSALALMG
FYIFWIRTPRIIFKQRGFFFANVWIEYNRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family [H]

Homologues:

Organism=Escherichia coli, GI1788123, Length=152, Percent_Identity=88.8157894736842, Blast_Score=277, Evalue=3e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009328
- ProDom:   PD091196 [H]

Pfam domain/function: PF06173 DUF986 [H]

EC number: NA

Molecular weight: Translated: 17798; Mature: 17666

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLRRGRIDSVIFVGLVAILIYN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC
NVTSHGAQMTTWLLSALALMGFYIFWIRTPRIIFKQRGFFFANVWIEYNRIKEMNLSEDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEECHHEECCCCCCC
VLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ
EEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLRRGRIDSVIFVGLVAILIYN
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHC
NVTSHGAQMTTWLLSALALMGFYIFWIRTPRIIFKQRGFFFANVWIEYNRIKEMNLSEDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEEEECHHEECCCCCCC
VLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ
EEEEEEHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]