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The map label for this gene is yobB [H]

Identifier: 29141481

GI number: 29141481

Start: 1089796

End: 1090452

Strand: Reverse

Name: yobB [H]

Synonym: t1000

Alternate gene names: 29141481

Gene position: 1090452-1089796 (Counterclockwise)

Preceding gene: 29141482

Following gene: 29141480

Centisome position: 22.76

GC content: 53.12

Gene sequence:

>657_bases
ATGTCCTCCTGGAAAATTGCCGCTGCGCAGTACGCGCCCCTGAACGCTTCGCCGGCAGAGCATGTCGCCCATCATCTGGA
ATATATTGAGCTTGCGGCTCGTCAACAGTGCGAACTGCTGGTCTTTCCGTCACTGTCGCTATTAGGCTGCGACGAAAGAA
ATAAACCGTTGCCCGCCCCGCCTGACGAGGCGCTTTTACAGCCGCTCACTCATGCGGCCGATACCCACCATATGACTATC
ATTGTGGGTATGCCTGTTGAGCATAACTGCCGCTTCGTAAAAGGCATCGCTATTTTTGCCCCATGGCTAACGTCGCCGCT
CATGTTTCACAAAAGTCATGGCGCCTGTATTGCCAGGCAGCGAAGCGCTATCAACGTGGTGGATGAGCAGCCAGAAGGTG
GTGATATAGGCCCCTCATTTACGTTATTCACAACCAGTCAATGTCTTAACGAGCCTGAACTCCATGCTTCTACCTCACGC
TTACAACGTTTTTCGCATAAATATGCGCTGGCCGTACTGATGGCCAATGCCTGTGGCAGTAGCGCGCTGTGGGATGAAAG
CGGGCAACTTATTGTTCGTGCCGATTGCGGTTCGCTATTACTGACGGGTCTGCGCACAACCGAGGGTTGGCAAGGCGATA
TCATTCCATTACGCTAA

Upstream 100 bases:

>100_bases
ATAACGTTACACTTCCTTACATGCAGACGACTACATTATAAGGCGATTCTTAACCTATGCTTTTTAGAATGGCTGTAGAG
ACTATGAAAAGGAAGTCATT

Downstream 100 bases:

>100_bases
GGTCTTTGGGTGAGGAATGAATCATGTTGCGGATTATAGACACGGAAACCTGCGGGCTGCAGGGCGGGATCGTAGAGATA
GCCTCTGTAGATGTCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTI
IVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIGPSFTLFTTSQCLNEPELHASTSR
LQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR

Sequences:

>Translated_218_residues
MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTI
IVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIGPSFTLFTTSQCLNEPELHASTSR
LQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
>Mature_217_residues
SSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAPPDEALLQPLTHAADTHHMTII
VGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIGPSFTLFTTSQCLNEPELHASTSRL
QRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788148, Length=218, Percent_Identity=65.5963302752293, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 23811; Mature: 23679

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAP
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCC
PDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQ
CHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHCCCEEEECCCCCEEECC
RSAINVVDEQPEGGDIGPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGS
CCEEEEECCCCCCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
CCEECCCCCEEEEECCCHHHHHCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKPLPAP
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCC
PDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQ
CHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHCCCEEEECCCCCEEECC
RSAINVVDEQPEGGDIGPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGS
CCEEEEECCCCCCCCCCCCEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
SALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
CCEECCCCCEEEEECCCHHHHHCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]