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The map label for this gene is yesR [H]

Identifier: 29141448

GI number: 29141448

Start: 1053941

End: 1055077

Strand: Direct

Name: yesR [H]

Synonym: t0966

Alternate gene names: 29141448

Gene position: 1053941-1055077 (Clockwise)

Preceding gene: 29141447

Following gene: 29141450

Centisome position: 21.99

GC content: 52.68

Gene sequence:

>1137_bases
ATGGTTTATCCAGTCAAACACAGTCCGCTATTGCGTCAGCCTGAGCATTTTATCGCCAGAGATGAACTAAAAGCCCTGGT
GCAAAAGGTGACGCATAACCTGGTCAATATTAAAGATGAGACAGGCGAATTTTTATTGCGACTGGACGACGGACGCGTGA
TCGATACTAAAGGCTGGGCCGGATGGGAGTGGACGCACGGCGTGGGCCTGTACGGAATGTATCACTATTACCAACAGACC
GGCGACCAGACGATGCGTAAGATCATTGATGACTGGTTTGCCGATCGCTTTGCGGAAGGCGCGACGACGAAAAACGTTAA
TACGATGGCGCCGTTTTTAACGCTGGCGTATCGCTATGAAGAGACGCGTAATCCAGCGTATTTACCGTGGCTGGAAACGT
GGGCCGAATGGGCGATGAATGAAATGCCCCGTACCGATTACGGCGGAATGCAGCACATCACGCTGGCGGAGGAAAATCAT
CAGCAGATGTGGGACGACACGCTAATGATGACGGTGCTGCCGCTGGCGAAAATCGGTAAGCTGTTGAACCGGCCGGAATA
TGTGGAAGAGGCAACCTATCAGTTCCTGCTACACGTGCAGAATTTGATGGATAAAGAGACGGGGCTGTGGTTCCACGGCT
GGAGCTATGACGGTCATCATAACTTCGCTAACGCTCGCTGGGCGCGCGGCAACAGCTGGCTGACCATTGTGGTCCCGGAT
TTTCTTGAACTGCTGGACTTGCCGGAAAATAATGCCGTGCGCCGTTATCTGGTCCAGGTACTGAATGCGCAGATCGCCGC
GCTGGCGAAATGTCAGGATGAAAGCGGTTTGTGGCATACGCTGCTTGACGATCCGCACTCTTATCTTGAGGCGTCGGCGA
CGGCGGGTTTTGCCTACGGTATTCTTAAAGCGGTGCGCAAACGCTATGTCGAACGGCACTATGCGCAGGTGGCGGAAAAA
GCTATTCGGGGGATAGTGAAACATATCTCGCCGGAAGGCGAACTGCTGCAAACATCATTTGGCACTGGCATGGGCCACGA
TCTCGATTTTTACCGTCATATTCCGTTGACCTCTATGCCTTACGGGCAGGCGATGGCAATGCTGTGTTTGACGGAATATC
TGCGTAACTATTTCTGA

Upstream 100 bases:

>100_bases
GTTTCCGCCCAGCTTAGCTTTTACTGTAGCGAATCGACTGCGTCGGCGGTAAAACTGCACGCAGCACTGAATTCGACATT
ACACAGAGGTTAAGCAAATG

Downstream 100 bases:

>100_bases
TGTATGCAGATATTCCGGTCGTATCCTTGTCTGATGGCGCTTTGCTTATTTGACTATGGCGCCTGACCCGACTGTGTGGT
ATCAGCCTGTGGATCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: URH [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQT
GDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDYGGMQHITLAEENH
QQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVVPD
FLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAEK
AIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF

Sequences:

>Translated_378_residues
MVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQT
GDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDYGGMQHITLAEENH
QQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVVPD
FLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAEK
AIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF
>Mature_378_residues
MVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWAGWEWTHGVGLYGMYHYYQQT
GDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYEETRNPAYLPWLETWAEWAMNEMPRTDYGGMQHITLAEENH
QQMWDDTLMMTVLPLAKIGKLLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVVPD
FLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYGILKAVRKRYVERHYAQVAEK
AIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMPYGQAMAMLCLTEYLRNYF

Specific function: Catalyzes the hydrolysis of unsaturated rhamnogalacturonan disaccharide to yield unsaturated D- galacturonic acid and L-rhamnose. It cannot act on unsaturated glucuronyl hydrolase (UGL) substrates containing unsaturated D- glucuronic acid at the non-reduc

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 105 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010905 [H]

Pfam domain/function: PF07470 Glyco_hydro_88 [H]

EC number: NA

Molecular weight: Translated: 43882; Mature: 43882

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCC
GWEWTHGVGLYGMYHYYQQTGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ETRNPAYLPWLETWAEWAMNEMPRTDYGGMQHITLAEENHQQMWDDTLMMTVLPLAKIGK
HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
LLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVVPD
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEECCCCEEEEEHHH
FLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
ILKAVRKRYVERHYAQVAEKAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCHHHHCCCCCCCC
YGQAMAMLCLTEYLRNYF
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVYPVKHSPLLRQPEHFIARDELKALVQKVTHNLVNIKDETGEFLLRLDDGRVIDTKGWA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCC
GWEWTHGVGLYGMYHYYQQTGDQTMRKIIDDWFADRFAEGATTKNVNTMAPFLTLAYRYE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ETRNPAYLPWLETWAEWAMNEMPRTDYGGMQHITLAEENHQQMWDDTLMMTVLPLAKIGK
HCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
LLNRPEYVEEATYQFLLHVQNLMDKETGLWFHGWSYDGHHNFANARWARGNSWLTIVVPD
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEECCCCEEEEEHHH
FLELLDLPENNAVRRYLVQVLNAQIAALAKCQDESGLWHTLLDDPHSYLEASATAGFAYG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
ILKAVRKRYVERHYAQVAEKAIRGIVKHISPEGELLQTSFGTGMGHDLDFYRHIPLTSMP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCHHHHCCCCCCCC
YGQAMAMLCLTEYLRNYF
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]