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The map label for this gene is yedE [H]

Identifier: 29141399

GI number: 29141399

Start: 1007875

End: 1009140

Strand: Reverse

Name: yedE [H]

Synonym: t0912

Alternate gene names: 29141399

Gene position: 1009140-1007875 (Counterclockwise)

Preceding gene: 29141401

Following gene: 29141398

Centisome position: 21.06

GC content: 56.71

Gene sequence:

>1266_bases
GTGATCGGTGTAGTATGCGCACTTCTTGTTTCACACCTTCTGAGTTCAGAGGCTAAACACATGTCATGGCAACACTTCAA
GCAAACCTGGTTAATTAAATTCTGGGCGCCGGCCCCTGCGGTGATCGCAGCCGGTATTCTCTCTACCTACTATTTTGGCA
TCACCGGCACGTTTTGGGCCGTGACGGGCGAATTTACCCGCTGGGGCGGGCAAATTTTGCAGCTTTTTGGCGTTCATGCC
GAACAGTGGGGCTACTACAAGCTGATTCATCTGGAAGGTACGCCGCTGACGCGTATCGACGGCATGATGATCCTCGGCAT
GTTCGGCGGCTGTTTCGCCGCGGCGCTGTGGGCCAACAACGTAAAACTGCGTATGCCGCGCAGCCGAATCCGTATCGTAC
AGGCGGTGGTCGGAGGCATGATCGCTGGCTTCGGCGCGCGTCTGGCGATGGGGTGTAACCTGGCCGCCTTTTTTACCGGG
ATCCCGCAGTTCTCCCTACACGCGTGGTTCTTTGCGCTGGCGACCGCTATCGGTTCCTGGTTCGGCGCCCGCTTTACGTT
GCTGCCGATATTTCGCATACCGGTGAAAATGCAAAAGGTCTCCGCGGCTTCGCCACTGACGCAGAAACCGGATCAGGCAA
GACGGCGTTTCAGGCTCGGTATGCTGGTCTTTATCGGCATGATTGGCTGGGCGTTATTAACGGCAATGCATCAGCCGAAA
CTGGGGCTGGCGATGCTGTTCGGCGTCGGGTTTGGGCTGCTGATCGAGCGCGCGCAAATCTGCTTTACCTCGGCCTTTCG
CGATCTGTGGATCTCCGGACGCGCCCATATGGCGAAAGCGATTATTTTTGGCATGGCGGTCAGCGCCATTGGTATTTTCA
GCTACGTGCAGTTGGGCGTTGCACCTAAAATTATGTGGGCTGGCCCGAATGCGGTCATTGGCGGACTGCTGTTCGGTTTT
GGCATCGTGCTGGCGGGCGGCTGCGAAACCGGCTGGATGTACCGCGCCGTAGAAGTCCAGGTGCATTACTGGTGGGTGGG
CCTCGGCAATGTCATCGGTTCGACCATCCTGGCTTACTACTGGGATGATTTCGCGCCCGCGCTGGCGACCAGTTGGGATA
AAGTTAACCTGCTGAATACCTTTGGTCCGCTGGGGGGTCTGCTGGTCACCTATCTGTTGTTATTTACCGCGCTGATGTTA
ATCATCGGCTGGGAAAAACGTTTTTTCCGCCGTGCGGGGCTGACGCCTGCTAAGGAATCTGTATGA

Upstream 100 bases:

>100_bases
AGAATTGTGGCATTAAAGCCCTGACGCCGCCAGCCTTTCCAGGCGCTGGCCGCAATTTGATCCAGTCGGTATTACCGCTT
ATTAGGTGTAGGCAAATTCT

Downstream 100 bases:

>100_bases
AAAATATCGTCCCTGATTACCGTCTGGATATGGTTGGCGAACCTTGCCCGTACCCGGCGGTCGCCACTCTGGAAGCGATG
CCGCAGCTAAAAAAAGGTGA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MIGVVCALLVSHLLSSEAKHMSWQHFKQTWLIKFWAPAPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQILQLFGVHA
EQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIVQAVVGGMIAGFGARLAMGCNLAAFFTG
IPQFSLHAWFFALATAIGSWFGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFIGMIGWALLTAMHQPK
LGLAMLFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYVQLGVAPKIMWAGPNAVIGGLLFGF
GIVLAGGCETGWMYRAVEVQVHYWWVGLGNVIGSTILAYYWDDFAPALATSWDKVNLLNTFGPLGGLLVTYLLLFTALML
IIGWEKRFFRRAGLTPAKESV

Sequences:

>Translated_421_residues
MIGVVCALLVSHLLSSEAKHMSWQHFKQTWLIKFWAPAPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQILQLFGVHA
EQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIVQAVVGGMIAGFGARLAMGCNLAAFFTG
IPQFSLHAWFFALATAIGSWFGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFIGMIGWALLTAMHQPK
LGLAMLFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYVQLGVAPKIMWAGPNAVIGGLLFGF
GIVLAGGCETGWMYRAVEVQVHYWWVGLGNVIGSTILAYYWDDFAPALATSWDKVNLLNTFGPLGGLLVTYLLLFTALML
IIGWEKRFFRRAGLTPAKESV
>Mature_421_residues
MIGVVCALLVSHLLSSEAKHMSWQHFKQTWLIKFWAPAPAVIAAGILSTYYFGITGTFWAVTGEFTRWGGQILQLFGVHA
EQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANNVKLRMPRSRIRIVQAVVGGMIAGFGARLAMGCNLAAFFTG
IPQFSLHAWFFALATAIGSWFGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFIGMIGWALLTAMHQPK
LGLAMLFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYVQLGVAPKIMWAGPNAVIGGLLFGF
GIVLAGGCETGWMYRAVEVQVHYWWVGLGNVIGSTILAYYWDDFAPALATSWDKVNLLNTFGPLGGLLVTYLLLFTALML
IIGWEKRFFRRAGLTPAKESV

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=399, Percent_Identity=91.9799498746867, Blast_Score=724, Evalue=0.0,
Organism=Escherichia coli, GI1788323, Length=102, Percent_Identity=38.2352941176471, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 46368; Mature: 46368

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGVVCALLVSHLLSSEAKHMSWQHFKQTWLIKFWAPAPAVIAAGILSTYYFGITGTFWA
CHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEE
VTGEFTRWGGQILQLFGVHAEQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANN
EECHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
VKLRMPRSRIRIVQAVVGGMIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAIGSW
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFIGMIGWALLTAMHQPK
HCCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LGLAMLFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYVQLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
APKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEVQVHYWWVGLGNVIGSTILAYY
CCEEEECCCHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHH
WDDFAPALATSWDKVNLLNTFGPLGGLLVTYLLLFTALMLIIGWEKRFFRRAGLTPAKES
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
V
C
>Mature Secondary Structure
MIGVVCALLVSHLLSSEAKHMSWQHFKQTWLIKFWAPAPAVIAAGILSTYYFGITGTFWA
CHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEE
VTGEFTRWGGQILQLFGVHAEQWGYYKLIHLEGTPLTRIDGMMILGMFGGCFAAALWANN
EECHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
VKLRMPRSRIRIVQAVVGGMIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAIGSW
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFIGMIGWALLTAMHQPK
HCCHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LGLAMLFGVGFGLLIERAQICFTSAFRDLWISGRAHMAKAIIFGMAVSAIGIFSYVQLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
APKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEVQVHYWWVGLGNVIGSTILAYY
CCEEEECCCHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHH
WDDFAPALATSWDKVNLLNTFGPLGGLLVTYLLLFTALMLIIGWEKRFFRRAGLTPAKES
HHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]