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The map label for this gene is yedQ [H]

Identifier: 29141378

GI number: 29141378

Start: 991424

End: 993127

Strand: Direct

Name: yedQ [H]

Synonym: t0891

Alternate gene names: 29141378

Gene position: 991424-993127 (Clockwise)

Preceding gene: 29141377

Following gene: 29141381

Centisome position: 20.69

GC content: 53.11

Gene sequence:

>1704_bases
GTGCCGCACGAAACACTGTTAGACAATCAAGGCTGGTTTAAAAAGCTGGCGCGGCGTTTTGGTCCCGGTCATGTCGTCAA
CACCTGTTTTCTGATCGTGATGCTGTTCTCGACGCTACTTACCTGGCGGGAAGTTATGATACTGAAAGACGCGTATGTCG
CCAGTCAGCGCAATCATCTGGGGAGCGTCGCGAATGTCCTTGACCGCCAACTGCAATTCAACATGGACAGGTTGATCTTT
TTACGCAACGGTATGCATGAAGCGCTGGTGGCGCCGCTGGCTTTTTCCGCATTGCAAAGCGCGGTGACGCAGTTTGAGCA
ACGACGCGTCAGACATTTCTGGCAACTGGAGTTGGATAAACGGCGGACATTGCCGTTATATGGCGTTTCCGATCAATTTG
TCGCCCGGACGACGCTTCTTTCGCGGGAGAGTCGTGACCTGGCAAATGAATTAACCGCCACGCTGGAGTTAGGGTATCTG
GCGCGCTCATCCGCCATGCTGACGCTGGAGACGATGTATGTTTCTCGCTCAGGGTTTTACCTCTCAACTCTCCCTACGGC
GTACGGTAGCGATATTGTTTCCCGTTACTATCAGTACGTGACCCAGCCCTGGTTTATCGAGCAAAGCCAACGGCGTAATC
CACAGCGCGGCGTGCGGTGGTTTACCTCCGCACAGCCCTATGTTGCTGACGAGCAGAAAAAAGTGACAGCCAGTCTACCG
CTGGATCACGATAATTACTGGTATGGCGTACTGGCAATGGATATTCCCGTCGCGTCATTACAGCAGTTTCTGCGCGATGC
GGCCGAAAAGGATATTGAAGGGGAATATCAGCTATACGATAACCATCTCCGTTTGTTGACGGACTCCGCGCCGGAACAAC
AAACCGAGAATACGTTAAATGACCGTGAGCGCGCCTTACTGGCGCGTGAAATAGAAAAAGATACCCTGGGCGGGCTGCGT
TTAGGAACGCATTATGTAAGCTGGGAGCGGCTGGATCATTTTGATGGCGTCCTGCTGCGCGTGCATACATTACGTGAAGG
TATACAAGGGAATTTTGGCAGTATTAGTATCGCGCTGACGCTGTTATGGGGGCTTTTTACGGCGATGCTGTTGATCTCCT
GGGGCGTTATTCGACATATGGTCAAAAATATGTTTGTTCTGCAAAATTCGCCGCAATGGCAGGCATGGCACGATCCGCTG
ACCCGGCTATATAACCGTGGCGCGCTGTTTGAAAAAGCGTCCAGGCTGGCAAAGCGCTATCGGGAAGCCCGCCAGCCATT
TTCTGTGATACAGCTGGATTTAGATTATTTTAAAAGCGTTAACGATCGCTTTGGCCATCAGGCAGGCGATCGCGTGTTGT
CCCATGCCGCTGGGCTCATTGGCAGCACCATTCGAGCGCACGACATCGCCGGACGGGTAGGGGGCGAAGAGTTTTGTATC
GTGCTGCCCGGCGCGACGAAAGCGCAGGCGCTGCAGATTGCCGAACGCATACGCCAGCGCATTAATGACAAAGAGATTCT
GGTGACGAAAAGCACGACGCTTCGTATCAGCGCGTCAATGGGGATCAGTAGCGCGGAGGAATACGGCGACTATGATTTTG
AGCAGTTGCAGTCGCTGGCCGACAAACGGCTTTATTACGCCAAACAGTCCGGACGTAACCGTATTTGCGCCAGCGACGCG
ACTCAGGAGCGGGAAAAGAAATAG

Upstream 100 bases:

>100_bases
CTGCTACCTGGTTATGCCAGGATTGAGTGGTATCCCTTGATGAGGTCTGGCTACCGTAAGCCATCAGGGGGCGTTGTATC
AATAACCAGGAGTTACCAGG

Downstream 100 bases:

>100_bases
TCCATTCCTTCGCGCCAGCCATCCGGCCCTTCGTTCTGGCTACGGTAGACGCGCTGAGGATCGTCGTTACGCAAATGTAC
ACCCTCCCGGTTTAGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHLGSVANVLDRQLQFNMDRLIF
LRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDKRRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYL
ARSSAMLTLETMYVSRSGFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVADEQKKVTASLP
LDHDNYWYGVLAMDIPVASLQQFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTENTLNDRERALLAREIEKDTLGGLR
LGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISIALTLLWGLFTAMLLISWGVIRHMVKNMFVLQNSPQWQAWHDPL
TRLYNRGALFEKASRLAKRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEEFCI
VLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNRICASDA
TQEREKK

Sequences:

>Translated_567_residues
MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHLGSVANVLDRQLQFNMDRLIF
LRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDKRRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYL
ARSSAMLTLETMYVSRSGFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVADEQKKVTASLP
LDHDNYWYGVLAMDIPVASLQQFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTENTLNDRERALLAREIEKDTLGGLR
LGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISIALTLLWGLFTAMLLISWGVIRHMVKNMFVLQNSPQWQAWHDPL
TRLYNRGALFEKASRLAKRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEEFCI
VLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNRICASDA
TQEREKK
>Mature_566_residues
PHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHLGSVANVLDRQLQFNMDRLIFL
RNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDKRRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYLA
RSSAMLTLETMYVSRSGFYLSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVADEQKKVTASLPL
DHDNYWYGVLAMDIPVASLQQFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTENTLNDRERALLAREIEKDTLGGLRL
GTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISIALTLLWGLFTAMLLISWGVIRHMVKNMFVLQNSPQWQAWHDPLT
RLYNRGALFEKASRLAKRYREARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEEFCIV
LPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQSLADKRLYYAKQSGRNRICASDAT
QEREKK

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=562, Percent_Identity=65.6583629893238, Blast_Score=794, Evalue=0.0,
Organism=Escherichia coli, GI1787262, Length=176, Percent_Identity=32.9545454545455, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI145693134, Length=158, Percent_Identity=36.7088607594937, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI1787802, Length=162, Percent_Identity=35.8024691358025, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1788381, Length=171, Percent_Identity=35.672514619883, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87081881, Length=183, Percent_Identity=32.7868852459016, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87081974, Length=221, Percent_Identity=31.2217194570136, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1788085, Length=184, Percent_Identity=33.1521739130435, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1786584, Length=157, Percent_Identity=31.8471337579618, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787816, Length=123, Percent_Identity=34.9593495934959, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI87081977, Length=108, Percent_Identity=36.1111111111111, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1787056, Length=178, Percent_Identity=30.8988764044944, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788956, Length=159, Percent_Identity=35.2201257861635, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787541, Length=164, Percent_Identity=32.3170731707317, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 65100; Mature: 64969

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHL
CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVANVLDRQLQFNMDRLIFLRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDK
HHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYLARSSAMLTLETMYVSRSGFY
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCE
LSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVADEQKKVTASLP
EEECCCHHCHHHHHHHHHHHCCCCEECCHHCCCHHHHHHHHCCCCCCCCCCCCCEEEECC
LDHDNYWYGVLAMDIPVASLQQFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTENTLN
CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHCHHHEEECCCCCHHHHHHHH
DRERALLAREIEKDTLGGLRLGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISIALT
HHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLWGLFTAMLLISWGVIRHMVKNMFVLQNSPQWQAWHDPLTRLYNRGALFEKASRLAKRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
REARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEEFCI
HHHHCCHHEEHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQSLA
EECCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCHHHHCCCCHHHHHHHH
DKRLYYAKQSGRNRICASDATQEREKK
HHHHHHHHHCCCCCEECCCCCHHHCCC
>Mature Secondary Structure 
PHETLLDNQGWFKKLARRFGPGHVVNTCFLIVMLFSTLLTWREVMILKDAYVASQRNHL
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSVANVLDRQLQFNMDRLIFLRNGMHEALVAPLAFSALQSAVTQFEQRRVRHFWQLELDK
HHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RRTLPLYGVSDQFVARTTLLSRESRDLANELTATLELGYLARSSAMLTLETMYVSRSGFY
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCE
LSTLPTAYGSDIVSRYYQYVTQPWFIEQSQRRNPQRGVRWFTSAQPYVADEQKKVTASLP
EEECCCHHCHHHHHHHHHHHCCCCEECCHHCCCHHHHHHHHCCCCCCCCCCCCCEEEECC
LDHDNYWYGVLAMDIPVASLQQFLRDAAEKDIEGEYQLYDNHLRLLTDSAPEQQTENTLN
CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHCHHHEEECCCCCHHHHHHHH
DRERALLAREIEKDTLGGLRLGTHYVSWERLDHFDGVLLRVHTLREGIQGNFGSISIALT
HHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LLWGLFTAMLLISWGVIRHMVKNMFVLQNSPQWQAWHDPLTRLYNRGALFEKASRLAKRY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
REARQPFSVIQLDLDYFKSVNDRFGHQAGDRVLSHAAGLIGSTIRAHDIAGRVGGEEFCI
HHHHCCHHEEHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
VLPGATKAQALQIAERIRQRINDKEILVTKSTTLRISASMGISSAEEYGDYDFEQLQSLA
EECCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCHHHHCCCCHHHHHHHH
DKRLYYAKQSGRNRICASDATQEREKK
HHHHHHHHHCCCCCEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA