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The map label for this gene is yodC [H]

Identifier: 29141377

GI number: 29141377

Start: 991014

End: 991259

Strand: Direct

Name: yodC [H]

Synonym: t0890

Alternate gene names: 29141377

Gene position: 991014-991259 (Clockwise)

Preceding gene: 29141375

Following gene: 29141378

Centisome position: 20.68

GC content: 51.63

Gene sequence:

>246_bases
ATGCAAAATTGTCCATCCTCGTCTAAGGTGAAAACGTTTCATCTGATACAGGAGGCAGGTATGGTCTTTTCTGTCAGTGA
GGAAGTTACCGTGAAAGAGGGTGGACCCCGGATGATCGTCACCGGTTATTCCAGCGGAATGGTAGAGTGTCGCTGGTATG
ATGGTTTTGGCGTAAAGCGGGAGGCATTCCATGAGAATGAGCTCGTGCCAGGCAAGGAAAGGCGCGTGCGGGATGAAGCC
CGATGA

Upstream 100 bases:

>100_bases
AATCTGGTGCTCGGCTTTATTATCGGCGCCATTGTGGTGGCGCTGGTGAAAGGTGTGGCGAAAATTCGCGGTGTTTCGCA
CTGATTTTCTACAATGAATT

Downstream 100 bases:

>100_bases
CAAAACGCCCGGTTAATGCCGGGCGTTTTGCTGTGGAGAAAAAGAGTCGTCGCGCTGCGACATGCTGCTACCTGGTTATG
CCAGGATTGAGTGGTATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MQNCPSSSKVKTFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELVPGKERRVRDEA
R

Sequences:

>Translated_81_residues
MQNCPSSSKVKTFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELVPGKERRVRDEA
R
>Mature_81_residues
MQNCPSSSKVKTFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKREAFHENELVPGKERRVRDEA
R

Specific function: Unknown

COG id: COG5475

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788267, Length=59, Percent_Identity=83.0508474576271, Blast_Score=102, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019226 [H]

Pfam domain/function: PF09926 DUF2158 [H]

EC number: NA

Molecular weight: Translated: 9183; Mature: 9183

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNCPSSSKVKTFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKR
CCCCCCCCCEEEEEEEHHCCEEEECCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCC
EAFHENELVPGKERRVRDEAR
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQNCPSSSKVKTFHLIQEAGMVFSVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGFGVKR
CCCCCCCCCEEEEEEEHHCCEEEECCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCC
EAFHENELVPGKERRVRDEAR
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]