| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yegB [H]
Identifier: 29141245
GI number: 29141245
Start: 822836
End: 824248
Strand: Reverse
Name: yegB [H]
Synonym: t0743
Alternate gene names: 29141245
Gene position: 824248-822836 (Counterclockwise)
Preceding gene: 29141246
Following gene: 29141244
Centisome position: 17.2
GC content: 54.21
Gene sequence:
>1413_bases ATGACAGAATTTCCTGACAACACCCGCTGGCAACTCTGGATTGTGGCATTCGGCTTTTTTATGCAGTCGCTGGATACCAC CATCGTCAACACTGCGCTGCCTTCCATGGCGAAAAGCCTGGGGGAAAGCCCGCTGCATATGCACATGGTAGTGGTGTCAT ATGTTCTCACCGTCGCCGTGATGCTCCCCGCCAGCGGCTGGCTGGCAGACAAAATCGGCGTGCGTAATATTTTCTTTGCC GCCATCGTGCTGTTCACGCTGGGTTCGCTGTTTTGCGCCCTCTCCGGTACGCTTAATCAACTGGTATTAGCGCGAGTTTT ACAAGGCGTAGGCGGCGCGATGATGGTGCCGGTCGGACGCCTGACGGTCATGAAAATCGTGCCGCGTGCGCAATATATGG CGGCGATGACCTTCGTCGCCCTACCGGGACAGATCGGGCCGTTACTCGGCCCCGCGCTGGGCGGGGTGCTGGTGGAATAT GCTTCATGGCACTGGATCTTTCTGATCAATATCCCGGTGGGAATTGTCGGCGCTATGGCGACCTTTATGCTGATGCCAAA CTACACCATAGAGACCCGGCGCTTTGATCTGCCGGGGTTCCTGCTGTTAGCTATCGGCATGGCGGTACTCACGCTGGCGC TGGACGGTAGTAAAAGCATGGGGATTTCGCCCTGGACATTAGCCGGACTTGCTGCGGGTGGCGCGGCAGCCATTCTGCTC TATCTCTTCCATGCCAAAAAAAACTCAGGTGCGTTATTCAGCCTGCGATTGTTCCGCACGCCCACGTTTTCACTGGGGTT GCTGGGCAGTTTTGCCGGGCGTATCGGCAGCGGTATGCTGCCGTTTATGACGCCGGTCTTTTTACAAATTGGTCTTGGTT TTTCACCGTTTCATGCCGGTTTGATGATGATCCCCATGGTGCTGGGCAGCATGGGAATGAAGCGGATTGTGGTGCAGATA GTTAACCGTTTTGGCTATCGTCGGGTTCTGGTAGCGACCACGCTCGGACTGGCATTGGTTAGCCTGTTGTTTATGTCGGT CGCGCTGCTCGGCTGGTATTATCTCCTGCCGCTGGTACTGCTTTTGCAGGGAATGGTGAACTCGGCGCGCTTTTCTTCCA TGAATACCTTAACGCTAAAAGACCTTCCCGATACGCTGGCCAGCAGCGGCAATAGCTTATTATCGATGATTATGCAGCTC TCGATGAGTATTGGCGTCACTATTGCCGGAATGCTGCTGGGTATGTTTGGCCAACAGCATATCGGGATAGACAGTAGCGC CACACATCACGTCTTTATGTACACCTGGTTATGTATGGCGGTTATTATCGCGCTACCGGCGATAATTTTTGCCCGCGTGC CGAACGATACACAGCAAAACATGGTCATTTCACGGCGTAAAAGGAGCCTGTAA
Upstream 100 bases:
>100_bases GCCAGCTCCTGACGCTCTATACCACGCCGGTGGTGTACCTCTTTTTCGACCGTCTGCGGCTGCGTTTTTCGCGTAAAAAT AGCAAACCGGTAGTAGAGAT
Downstream 100 bases:
>100_bases TGAAAGTCTGGCGGCCCGGAATCACCGGCAAGCTGTTTCTGGCGATTTTCGCCACCTGCATCGTGCTGCTGATCAGTATG CATTGGGCCGTGCGCGTCAG
Product: multidrug efflux system protein MdtE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFA AIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEY ASWHWIFLINIPVGIVGAMATFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILL YLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQI VNRFGYRRVLVATTLGLALVSLLFMSVALLGWYYLLPLVLLLQGMVNSARFSSMNTLTLKDLPDTLASSGNSLLSMIMQL SMSIGVTIAGMLLGMFGQQHIGIDSSATHHVFMYTWLCMAVIIALPAIIFARVPNDTQQNMVISRRKRSL
Sequences:
>Translated_470_residues MTEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFA AIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEY ASWHWIFLINIPVGIVGAMATFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILL YLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQI VNRFGYRRVLVATTLGLALVSLLFMSVALLGWYYLLPLVLLLQGMVNSARFSSMNTLTLKDLPDTLASSGNSLLSMIMQL SMSIGVTIAGMLLGMFGQQHIGIDSSATHHVFMYTWLCMAVIIALPAIIFARVPNDTQQNMVISRRKRSL >Mature_469_residues TEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFAA IVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEYA SWHWIFLINIPVGIVGAMATFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILLY LFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQIV NRFGYRRVLVATTLGLALVSLLFMSVALLGWYYLLPLVLLLQGMVNSARFSSMNTLTLKDLPDTLASSGNSLLSMIMQLS MSIGVTIAGMLLGMFGQQHIGIDSSATHHVFMYTWLCMAVIIALPAIIFARVPNDTQQNMVISRRKRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI1788392, Length=469, Percent_Identity=85.7142857142857, Blast_Score=774, Evalue=0.0, Organism=Escherichia coli, GI1790195, Length=459, Percent_Identity=45.5337690631808, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI1789042, Length=401, Percent_Identity=27.6807980049875, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1788710, Length=422, Percent_Identity=27.4881516587678, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI87081983, Length=413, Percent_Identity=28.5714285714286, Blast_Score=131, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6322958, Length=174, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6319770, Length=287, Percent_Identity=27.1777003484321, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6321663, Length=150, Percent_Identity=30.6666666666667, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325455, Length=125, Percent_Identity=32, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323735, Length=164, Percent_Identity=28.0487804878049, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50785; Mature: 50654
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MLPASGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHH LTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH TFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILL HHHHCCCCEEECEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHH YLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH LMMIPMVLGSMGMKRIVVQIVNRFGYRRVLVATTLGLALVSLLFMSVALLGWYYLLPLVL HHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQGMVNSARFSSMNTLTLKDLPDTLASSGNSLLSMIMQLSMSIGVTIAGMLLGMFGQQH HHHHHHHHHHHCCCCEEEHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGIDSSATHHVFMYTWLCMAVIIALPAIIFARVPNDTQQNMVISRRKRSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TEFPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH MLPASGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHH LTVMKIVPRAQYMAAMTFVALPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHH TFMLMPNYTIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILL HHHHCCCCEEECEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHH YLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH LMMIPMVLGSMGMKRIVVQIVNRFGYRRVLVATTLGLALVSLLFMSVALLGWYYLLPLVL HHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQGMVNSARFSSMNTLTLKDLPDTLASSGNSLLSMIMQLSMSIGVTIAGMLLGMFGQQH HHHHHHHHHHHCCCCEEEHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGIDSSATHHVFMYTWLCMAVIIALPAIIFARVPNDTQQNMVISRRKRSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA