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The map label for this gene is stcA [H]

Identifier: 29141210

GI number: 29141210

Start: 790728

End: 791258

Strand: Direct

Name: stcA [H]

Synonym: t0704

Alternate gene names: 29141210

Gene position: 790728-791258 (Clockwise)

Preceding gene: 29141209

Following gene: 29141211

Centisome position: 16.5

GC content: 42.56

Gene sequence:

>531_bases
ATGAAACGTTCACTTATTGCTGCTTCTGTATTGTCTGCTGTATTTATGAGCGCTGGGGCTTTTGCTGTTGATGAGTATGA
TTCAGGCGTTCTGAATATTAACGGAAAGGTGGTTGGTACTACCTGTCAATTTTTGGGTACGAACACCGCTGAAATTAGAC
TGAATGAAATTGGTGCGGATAAAATAATTAATTTAACCCCGGGTCAGATTTATGACGCAGTAACTAATCAAACTCAGATG
CCGTTGAAAATAAAATGTCAACAGGGTGTAGCGCCGCGTATTACCTTCTCTTCAACGCAATTTGACAGCCACGATATCAC
ATTTAATAACGGGTCTGCCAAAGGTGTCGGTTTTGCGGTTTACTACGGAAGTACGGATAATCAGATTGATCCAGAGACGG
GGGTGACACTAGATCCAAATAGCAGCGGTGAATACGACCTGACTTTTTTAGCACGCTATGCGCGTTTAGACGGTGATGTT
GCTTCTGGTGATGTTAGCTCAACACTGACTTTAACGGTTGTTACTGACTAA

Upstream 100 bases:

>100_bases
CATCGTGTTTACATTGCGATAACTTCCTGTCTATGAGAATTTTCGTTGCAAGGGTTAATAACTCTTAACAAATAGAAATT
ACTTCATTAAGGAAGAGATT

Downstream 100 bases:

>100_bases
TTTATTCAACCGGCGGCGTTCGTCGCCGGTTTTTTATAAGCAAGGCCGTGTAAATATGAAAATATTATCTGCAGTATTAT
TATCTGCCATAATTTTGCCT

Product: fimbrial subunit protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQFLGTNTAEIRLNEIGADKIINLTPGQIYDAVTNQTQM
PLKIKCQQGVAPRITFSSTQFDSHDITFNNGSAKGVGFAVYYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDV
ASGDVSSTLTLTVVTD

Sequences:

>Translated_176_residues
MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQFLGTNTAEIRLNEIGADKIINLTPGQIYDAVTNQTQM
PLKIKCQQGVAPRITFSSTQFDSHDITFNNGSAKGVGFAVYYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDV
ASGDVSSTLTLTVVTD
>Mature_176_residues
MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQFLGTNTAEIRLNEIGADKIINLTPGQIYDAVTNQTQM
PLKIKCQQGVAPRITFSSTQFDSHDITFNNGSAKGVGFAVYYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDV
ASGDVSSTLTLTVVTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788429, Length=184, Percent_Identity=32.6086956521739, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18678; Mature: 18678

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQFLGTNTAEIRLNEIGAD
CCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEECCCCEEEEEEEECCCC
KIINLTPGQIYDAVTNQTQMPLKIKCQQGVAPRITFSSTQFDSHDITFNNGSAKGVGFAV
EEEECCCCHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCEEEEE
YYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDVASGDVSSTLTLTVVTD
EECCCCCCCCCCCCCEECCCCCCCEEHHHEEEHHHCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKRSLIAASVLSAVFMSAGAFAVDEYDSGVLNINGKVVGTTCQFLGTNTAEIRLNEIGAD
CCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEECCCCEEEEEEEECCCC
KIINLTPGQIYDAVTNQTQMPLKIKCQQGVAPRITFSSTQFDSHDITFNNGSAKGVGFAV
EEEECCCCHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCEEEEE
YYGSTDNQIDPETGVTLDPNSSGEYDLTFLARYARLDGDVASGDVSSTLTLTVVTD
EECCCCCCCCCCCCCEECCCCCCCEEHHHEEEHHHCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]