Click here to switch to the map view.

The map label for this gene is ycgM [C]

Identifier: 29141185

GI number: 29141185

Start: 764021

End: 764722

Strand: Direct

Name: ycgM [C]

Synonym: t0678

Alternate gene names: 29141185

Gene position: 764021-764722 (Clockwise)

Preceding gene: 29141184

Following gene: 29141186

Centisome position: 15.94

GC content: 54.42

Gene sequence:

>702_bases
ATGACCAAATATGTATTCCAGCCGCAGGCCCCGGTGACAGTACCCGTGGCGGGCAGTGATGAGCAGTTTCCGGTACGTCG
CGTTTACTGCGTGGGTCGCAACTATGCCGCCCATGCCCGTGAAATGGGTTTTGATCCCGATCGCGAACCGCCGTTCTTCT
TTTGTAAACCAGCGGACGCTGTCGTCCCGGTAGCGGCGGGGGATACCCTGGAACTGCCGTATCCGGCGCAGACCGATAAC
TACCATTATGAAATTGAGCTGGTGGTGGCGATTGGTAAAAAGGGGAGCGATATCCCGCTAGAAAAAGCCCATGAATATGT
CTGGGGATACGCCACCGGTCTGGACATGACGCGTCGCGATCGTCAGATGGAAATGCGTCAGATGGGACGCCCGTGGGAAA
TTGGCAAAGCGTTCGATCTCTCCGCGCCCATTGCGCCATTACACAAAGCCGCTGAAACGCATAATGTGGATAACGCCCCT
ATTTGGCTACAGGTTAACGGCGAAGACCATCAGCGCAGCGATATTCGTCATCTGATTTGGTCGGTGAATGAAACCATCAG
CTATTTGTCCGGCTTTTTTGAATTGCAGCCAGGCGATTTGATTTTCACCGGTACGCCAGAGGGGGTGGGCGCAGTGGTGA
AAGGGGATGTCATCACCGGGAACGTAGAAGGTCTGACGCCGATTGCTGTGAAAATTGTCTGA

Upstream 100 bases:

>100_bases
CAGCAGCGAAGACACGGTGTTATTCAGCTTTTCGGACAAGCCGGTTCAGGAAGCCCTGGGGCTGTTCCGCGAAGCACGTT
ATTAATTAGGGAGAGAGAAC

Downstream 100 bases:

>100_bases
GGTGAACGATGAAGCTGTACAGTTTCTTTAATAGTTCGGCGTCTTATCGTGTACGTATTGCGCTGGCGTTAAAGGGGATT
GATTACCAGACAGTGGGCGT

Product: FAA-hydrolase-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPADAVVPVAAGDTLELPYPAQTDN
YHYEIELVVAIGKKGSDIPLEKAHEYVWGYATGLDMTRRDRQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAP
IWLQVNGEDHQRSDIRHLIWSVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVITGNVEGLTPIAVKIV

Sequences:

>Translated_233_residues
MTKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPADAVVPVAAGDTLELPYPAQTDN
YHYEIELVVAIGKKGSDIPLEKAHEYVWGYATGLDMTRRDRQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAP
IWLQVNGEDHQRSDIRHLIWSVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVITGNVEGLTPIAVKIV
>Mature_232_residues
TKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPADAVVPVAAGDTLELPYPAQTDNY
HYEIELVVAIGKKGSDIPLEKAHEYVWGYATGLDMTRRDRQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAPI
WLQVNGEDHQRSDIRHLIWSVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVITGNVEGLTPIAVKIV

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=210, Percent_Identity=40, Blast_Score=150, Evalue=6e-37,
Organism=Homo sapiens, GI66348062, Length=203, Percent_Identity=40.8866995073892, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI215422413, Length=207, Percent_Identity=40.0966183574879, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI156231349, Length=259, Percent_Identity=32.4324324324324, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI40786394, Length=259, Percent_Identity=32.046332046332, Blast_Score=116, Evalue=2e-26,
Organism=Escherichia coli, GI1787428, Length=208, Percent_Identity=38.4615384615385, Blast_Score=141, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17557057, Length=192, Percent_Identity=36.9791666666667, Blast_Score=134, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6324161, Length=221, Percent_Identity=28.9592760180996, Blast_Score=112, Evalue=6e-26,
Organism=Drosophila melanogaster, GI28571789, Length=212, Percent_Identity=33.9622641509434, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28572127, Length=218, Percent_Identity=33.4862385321101, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24663695, Length=221, Percent_Identity=27.1493212669683, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 25896; Mature: 25764

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPADA
CCCEEECCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCC
VVPVAAGDTLELPYPAQTDNYHYEIELVVAIGKKGSDIPLEKAHEYVWGYATGLDMTRRD
EEEEECCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHEEEEEECCCCCHHHH
RQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAPIWLQVNGEDHQRSDIRHLIW
HHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
SVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVITGNVEGLTPIAVKIV
HHHHHHHHHHHEEEECCCCEEEECCCCCCCEEEECCEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
TKYVFQPQAPVTVPVAGSDEQFPVRRVYCVGRNYAAHAREMGFDPDREPPFFFCKPADA
CCEEECCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCEEEECCCCC
VVPVAAGDTLELPYPAQTDNYHYEIELVVAIGKKGSDIPLEKAHEYVWGYATGLDMTRRD
EEEEECCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHEEEEEECCCCCHHHH
RQMEMRQMGRPWEIGKAFDLSAPIAPLHKAAETHNVDNAPIWLQVNGEDHQRSDIRHLIW
HHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHH
SVNETISYLSGFFELQPGDLIFTGTPEGVGAVVKGDVITGNVEGLTPIAVKIV
HHHHHHHHHHHEEEECCCCEEEECCCCCCCEEEECCEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]