| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is serB [C]
Identifier: 29141167
GI number: 29141167
Start: 743204
End: 744091
Strand: Reverse
Name: serB [C]
Synonym: t0658
Alternate gene names: 29141167
Gene position: 744091-743204 (Counterclockwise)
Preceding gene: 29141170
Following gene: 29141163
Centisome position: 15.53
GC content: 44.93
Gene sequence:
>888_bases ATGAGCATTATTTATTTTATTACTACACAGGATATCGATACGTTTCAGAAAAAATTACAGGAAACGTTATTTAATGCCGT CACCATGCCGTTTCCGCTATTATTTGATAAACGTTATGCCGCGCTTATCAATACCGCTTATTTAAAGCTTACGCTGCCAG CGGAATGTCTGACGCCTGAATTTTATCGCTATTTACGCGAACTCTCATTGCAATGGCAGTTTGATTTTTTTATTAAGCCG CAGCCACTGCCTGCTAACGGTATTATCGCGTTTGATATGGACTCGACATTTATTGCGGAAGAAGGCGTGGATGAAATTGC CCGCGAGCTTGGCATGTCGACGCAAATCACCGCCATTACCCAACAGGCGATGGAGGGCAAGCTTGATTTTAACGCCAGTT TTACCCGACGTATCGGAATGTTGAAAGGCACACCGAAAGCAGTGCTGAACGCCGTATGCGATCGCATGACCCTTTCGCCA GGCCTGTTAACTATTCTGCCAGTCATCAAGGCCAAAGGATTTAAAACCGCGATTATCTCCGGGGGACTGGATATATTCAC CCAGCGTCTAAAAGCGCGGTATCAACTGGATTATGCCTTTTCGAATACGGTTGAAATACGCGATAACGTTCTGACGGATA ACATTACCTTGCCGATTATGAACGCCGCAAACAAAAAACAGACGCTGGTTGACCTGGCTGCCCGGTTAAATATTGCCACG GAGAATATTATTGCCTGCGGTGATGGCGCCAACGATCTGCCGATGTTAGAACATGCTGGCACCGGTATTGCCTGGAAAGC GAAGCCGGTTGTACGGGAAAAAATCCACCATCAGATTAATTATCACGGTTTCGAATTGCTTCTTTTTCTTATTGAAGATG AATTATAA
Upstream 100 bases:
>100_bases CGCTTTTTTAGCCCTTTTCTGGCTGTGATATCTGTGATAGCACGAGATTCCACGCCGCAAAAGAGCCATTATAATACCCG TAAATTAAGGGAGTTATCAT
Downstream 100 bases:
>100_bases CGCGACTCACCTCGCCGGAAGGGAATTTTAAAATGAGTATAAAAACATTTATTTTCAGCCAGCCCGATAAGCCGATTGTA AAAGAGAAAAAAGAGATAGA
Product: hydrolase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALINTAYLKLTLPAECLTPEFYRYLRELSLQWQFDFFIKP QPLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSP GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIAT ENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLIEDEL
Sequences:
>Translated_295_residues MSIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALINTAYLKLTLPAECLTPEFYRYLRELSLQWQFDFFIKP QPLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSP GLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIAT ENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLIEDEL >Mature_294_residues SIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALINTAYLKLTLPAECLTPEFYRYLRELSLQWQFDFFIKPQ PLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSPG LLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIATE NIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLIEDEL
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=211, Percent_Identity=23.696682464455, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1790849, Length=195, Percent_Identity=40, Blast_Score=144, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6321647, Length=209, Percent_Identity=32.5358851674641, Blast_Score=115, Evalue=6e-27, Organism=Drosophila melanogaster, GI24661601, Length=208, Percent_Identity=27.8846153846154, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 33188; Mature: 33057
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALINTAYLKLTLPAECLTPE CEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCHHHCCHH FYRYLRELSLQWQFDFFIKPQPLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAIT HHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCCHHHHHH QQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIIS HHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEC GGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIAT CCHHHHHHHHHHHEEEEEEECCEEEECCCEEECCEEEEEECCCCHHHHHHHHHHHHCCCC ENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLIEDEL CCEEEECCCCCCCCHHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHEEEEECCCC >Mature Secondary Structure SIIYFITTQDIDTFQKKLQETLFNAVTMPFPLLFDKRYAALINTAYLKLTLPAECLTPE EEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEEECCHHHCCHH FYRYLRELSLQWQFDFFIKPQPLPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAIT HHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHCCHHHHHHHHCCCCHHHHHH QQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIIS HHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEC GGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAARLNIAT CCHHHHHHHHHHHEEEEEEECCEEEECCCEEECCEEEEEECCCCHHHHHHHHHHHHCCCC ENIIACGDGANDLPMLEHAGTGIAWKAKPVVREKIHHQINYHGFELLLFLIEDEL CCEEEECCCCCCCCHHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]