Click here to switch to the map view.

The map label for this gene is nlpB [H]

Identifier: 29140898

GI number: 29140898

Start: 440512

End: 441546

Strand: Direct

Name: nlpB [H]

Synonym: t0371

Alternate gene names: 29140898

Gene position: 440512-441546 (Clockwise)

Preceding gene: 29140897

Following gene: 29140899

Centisome position: 9.19

GC content: 57.78

Gene sequence:

>1035_bases
ATGGCTTACTCAGTACAAAAGTCGCGCCTGGCGAAGGTTGCGGGTGTTTCGCTTGTTTTGCTGCTCGCTGCCTGTAGTTC
CGATTCGCGCTACAAGCGCCAGGTAAGCGGCGATGAATCCTATCTGGATGCCGCGCCGCTTGCTGAACTTCACGCCCCGG
CAGGAATGATTCTGCCGATAACGACCGGCGACTACGTTATTCCGGTCACGAAGGGGAGCGGCGCGGTTGGTAAGGCGTTG
GATATCCGTCCGCCGGCGCAGCCGTTAGCGTTAGTGAGCGGCGCGCGTACCCAGTTCTCTGGCGATACCGCTACGCTATT
GGTGGAAAATGGCCGTAGCAGCACGCTGTGGCCGCAAGTCGTCAGCGTGATTCAGGCGAAAAATTATCCGATTGAAAAAC
GTGACGATGCCAGCCAGACCCTGACGACCGATTGGGTGAGCTGGAACCGCCTGGATGAAGACGAACAGTATCGCGGACGT
TATCAAATCTCGGTGAAGCCGCAGGGCTATCAGCAGGCGGTAACGGTAAAACTGGTTAATCTGGAACAGGCTGGCAAGCC
GGTCGCTGATGCGGCGTCGCTGCAGCGCTATAGCACTGAAATGATGAACGTCATTTCCGCCGGTCTGGATAAGACCGCTA
CGGATGCGGCAAATGCCGCGCAGAACCGTTCCGCCGCAACGATGGATGTGCAGAGCGCCGCTGATGATACCGGTTTACCT
ATGCTGGTCGTTCGCGGTCCGTTCAACCTCGTGTGGCAGCGTCTCCCGGCCGCGCTGGAAAAAGTGGGCATGAAAGTCAC
CGACAGCACTCGCTCTCAGGGCAGCATGGCGGTAACGTACAAACCGTTGTCTGACAGCGACTGGCGGGATCTGGGCGCTA
GCGACCCGGGCCTGGCATCCGGAGACTATAAATTGCAGGTCGGCGATTTAGATAACCGCAGCAGCTTGCAGTTTATCGAT
CCTAAGGGGCATACTCTGACGCAAAGCCAGAACGACGCGCTGGTTGCCGTCTTCCAGGCTGCGTTCAACAAGTAA

Upstream 100 bases:

>100_bases
ACGCTGCGCCTGCCAATGACGCCTATCACCGACCATGGTCGTGACATCGTCAAAGCAGCGCTTCAGCATGCTGGCCTGCT
GTAAAGTTTAGGGAGATTTG

Downstream 100 bases:

>100_bases
TTTAACAGGGCTGGAGCAATCCGGCCCTTTTTTCTGATAAGATACGCAAACGTGTGCGTCGGTACAAAAACGCGATTTAA
CCGCTATTTCGCACCACAAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDAAPLAELHAPAGMILPITTGDYVIPVTKGSGAVGKAL
DIRPPAQPLALVSGARTQFSGDTATLLVENGRSSTLWPQVVSVIQAKNYPIEKRDDASQTLTTDWVSWNRLDEDEQYRGR
YQISVKPQGYQQAVTVKLVNLEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAANAAQNRSAATMDVQSAADDTGLP
MLVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSMAVTYKPLSDSDWRDLGASDPGLASGDYKLQVGDLDNRSSLQFID
PKGHTLTQSQNDALVAVFQAAFNK

Sequences:

>Translated_344_residues
MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDAAPLAELHAPAGMILPITTGDYVIPVTKGSGAVGKAL
DIRPPAQPLALVSGARTQFSGDTATLLVENGRSSTLWPQVVSVIQAKNYPIEKRDDASQTLTTDWVSWNRLDEDEQYRGR
YQISVKPQGYQQAVTVKLVNLEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAANAAQNRSAATMDVQSAADDTGLP
MLVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSMAVTYKPLSDSDWRDLGASDPGLASGDYKLQVGDLDNRSSLQFID
PKGHTLTQSQNDALVAVFQAAFNK
>Mature_343_residues
AYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDAAPLAELHAPAGMILPITTGDYVIPVTKGSGAVGKALD
IRPPAQPLALVSGARTQFSGDTATLLVENGRSSTLWPQVVSVIQAKNYPIEKRDDASQTLTTDWVSWNRLDEDEQYRGRY
QISVKPQGYQQAVTVKLVNLEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAANAAQNRSAATMDVQSAADDTGLPM
LVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSMAVTYKPLSDSDWRDLGASDPGLASGDYKLQVGDLDNRSSLQFIDP
KGHTLTQSQNDALVAVFQAAFNK

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=344, Percent_Identity=92.1511627906977, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 36911; Mature: 36780

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDAAPLAELHAPAGMILPI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCHHHHCCCCCEEEEE
TTGDYVIPVTKGSGAVGKALDIRPPAQPLALVSGARTQFSGDTATLLVENGRSSTLWPQV
ECCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCCCEECCCEEEEEEECCCCCCHHHHH
VSVIQAKNYPIEKRDDASQTLTTDWVSWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLVN
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCEEEEEECCCCCCEEEEEEEEE
LEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAANAAQNRSAATMDVQSAADDTGLP
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEHHHCCCCCCCE
MLVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSMAVTYKPLSDSDWRDLGASDPGLAS
EEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCC
GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFNK
CCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHEEHHHHCC
>Mature Secondary Structure 
AYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDESYLDAAPLAELHAPAGMILPI
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCHHHHCCCCCEEEEE
TTGDYVIPVTKGSGAVGKALDIRPPAQPLALVSGARTQFSGDTATLLVENGRSSTLWPQV
ECCCEEEEEECCCCCCCCEEECCCCCCHHHHHCCCCCEECCCEEEEEEECCCCCCHHHHH
VSVIQAKNYPIEKRDDASQTLTTDWVSWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLVN
HHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCEEEEEECCCCCCEEEEEEEEE
LEQAGKPVADAASLQRYSTEMMNVISAGLDKTATDAANAAQNRSAATMDVQSAADDTGLP
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEHHHCCCCCCCE
MLVVRGPFNLVWQRLPAALEKVGMKVTDSTRSQGSMAVTYKPLSDSDWRDLGASDPGLAS
EEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCC
GDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFNK
CCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]