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The map label for this gene is csiE [H]

Identifier: 29140837

GI number: 29140837

Start: 348387

End: 349664

Strand: Reverse

Name: csiE [H]

Synonym: t0303

Alternate gene names: 29140837

Gene position: 349664-348387 (Counterclockwise)

Preceding gene: 29140839

Following gene: 29140834

Centisome position: 7.3

GC content: 54.77

Gene sequence:

>1278_bases
ATGATGCCGACAATTGCCCCACCATCTGTACTTTCCGCTCCCCAGCGCCGCTGTCAGGTATTGCTGACGCTTTTCCAGCC
GGAGCCAATTGCCACGGTGGAAATCTTCAGCGCGCTTAATGGCGTTGATGATGATACTGCCCGTGAGGATATCACTGACA
CAAGCCTGGAGATCCAGCGCTATCATCGCCTTGCCATCACAACATGCCAGAACGGTTGCTATCGGATCGAAGGTACAGCA
CTCGATCAGCGCCTTTGCCTTTTACACTGGCTCAGGCGCGGCCTGCGTTTATGCCCGACCTTCGTCACGCAACAGTTTAC
CCCGGCCTTAAAAAACGCGCTAAAGCAGCGCGGTATCGCGCGTCCGCTGTATGACGATATTAATCTGCACGCGCTCATCA
ATCTGTGCGCCCGCCGGTTGCAAAAACCATTTGAACATCGCGACGTGCAGTTCCTGCGTCTCTTTTTACAGTATTGTCTG
CTACAACACCATGCCGGCATCACCCCGGAATTCAATCCTGTACAGCAGATTTGGGCGCAGTCGTGTGCGGAATATCCACT
CGCCCAGGAAATTGGTCGTCACTGGCAGCGCCACGTGATGCAGGCCGCACCGCTCAATGAAGCGCTGTTTATGGCGTTAC
TGTTTTCAATGATTCGCCTCCCCGACCCGATTCGCGACACGCATCAACGGGCGCAGCAACTGCGACTGGAGGTGGCGCGG
CTGGTGCTGCGCTTTCGAGAAAAAGGGAACGTACGCTTCAGCGACGAACAAGGGCTTAACGATCAGCTGTATGTCCATCT
CGCCCAGGCGCTGAACCGAAGTTTATTCACGATTGGCATCGATAATACGCTTCCGGAAGAGTTCAACCGTCTTTATCCGC
GTCTGGTTCGCACCACACGTGAGGCGCTCGCCGGGTTTGAAGCCGAATATGGTATCCACTTTTCCGAGGAAGAGACGGGG
CTGGTGGCAGTGATTTTCGGCGCCTGGCTGATGCAGGATAACGATTTGCATGAGAGACAGATCGTATTGTTAGCGGATAA
AAATGATGCGCTGGAGACGCATATTGAGCAGCAACTGCGTGAACTGACCCTATTGCCGCTGAATATCAGACGGATATCGC
TCCAGGCGTTTCAAAAAGAGGGATGCCCGCGCGGCGTAGCGCTGATTGTTACCCCTTACGCCACGCCGCTACCGCTCTTC
TCACCGCCATTAATTCATGCGGATCGCGCCCTCACAGAGCACCAACAGCAGCAGATCCGCAAGATCCTGGAATCATGA

Upstream 100 bases:

>100_bases
GACACTCCTCAGCATTCCTGGCCTAAAAGCACACTTATCACATTTTTCACATGCAAACTTTAGCTATCCTTACCAGATAA
ACTAACGGGAGACCTGACAG

Downstream 100 bases:

>100_bases
CGCGGCAACCACTTTGGGCCGAAGGAAGATAGCGGGCAATGCCACCAGCGCCATAATCCAGAATACGCCGCCGCCCAGAT
GTTGATACAGAAAACCGGCA

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDDDTAREDITDTSLEIQRYHRLAITTCQNGCYRIEGTA
LDQRLCLLHWLRRGLRLCPTFVTQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFEHRDVQFLRLFLQYCL
LQHHAGITPEFNPVQQIWAQSCAEYPLAQEIGRHWQRHVMQAAPLNEALFMALLFSMIRLPDPIRDTHQRAQQLRLEVAR
LVLRFREKGNVRFSDEQGLNDQLYVHLAQALNRSLFTIGIDNTLPEEFNRLYPRLVRTTREALAGFEAEYGIHFSEEETG
LVAVIFGAWLMQDNDLHERQIVLLADKNDALETHIEQQLRELTLLPLNIRRISLQAFQKEGCPRGVALIVTPYATPLPLF
SPPLIHADRALTEHQQQQIRKILES

Sequences:

>Translated_425_residues
MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDDDTAREDITDTSLEIQRYHRLAITTCQNGCYRIEGTA
LDQRLCLLHWLRRGLRLCPTFVTQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFEHRDVQFLRLFLQYCL
LQHHAGITPEFNPVQQIWAQSCAEYPLAQEIGRHWQRHVMQAAPLNEALFMALLFSMIRLPDPIRDTHQRAQQLRLEVAR
LVLRFREKGNVRFSDEQGLNDQLYVHLAQALNRSLFTIGIDNTLPEEFNRLYPRLVRTTREALAGFEAEYGIHFSEEETG
LVAVIFGAWLMQDNDLHERQIVLLADKNDALETHIEQQLRELTLLPLNIRRISLQAFQKEGCPRGVALIVTPYATPLPLF
SPPLIHADRALTEHQQQQIRKILES
>Mature_425_residues
MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDDDTAREDITDTSLEIQRYHRLAITTCQNGCYRIEGTA
LDQRLCLLHWLRRGLRLCPTFVTQQFTPALKNALKQRGIARPLYDDINLHALINLCARRLQKPFEHRDVQFLRLFLQYCL
LQHHAGITPEFNPVQQIWAQSCAEYPLAQEIGRHWQRHVMQAAPLNEALFMALLFSMIRLPDPIRDTHQRAQQLRLEVAR
LVLRFREKGNVRFSDEQGLNDQLYVHLAQALNRSLFTIGIDNTLPEEFNRLYPRLVRTTREALAGFEAEYGIHFSEEETG
LVAVIFGAWLMQDNDLHERQIVLLADKNDALETHIEQQLRELTLLPLNIRRISLQAFQKEGCPRGVALIVTPYATPLPLF
SPPLIHADRALTEHQQQQIRKILES

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=425, Percent_Identity=71.5294117647059, Blast_Score=619, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 48971; Mature: 48971

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDDDTAREDITDTSLEIQR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHH
YHRLAITTCQNGCYRIEGTALDQRLCLLHWLRRGLRLCPTFVTQQFTPALKNALKQRGIA
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
RPLYDDINLHALINLCARRLQKPFEHRDVQFLRLFLQYCLLQHHAGITPEFNPVQQIWAQ
CCHHHCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SCAEYPLAQEIGRHWQRHVMQAAPLNEALFMALLFSMIRLPDPIRDTHQRAQQLRLEVAR
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVLRFREKGNVRFSDEQGLNDQLYVHLAQALNRSLFTIGIDNTLPEEFNRLYPRLVRTTR
HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH
EALAGFEAEYGIHFSEEETGLVAVIFGAWLMQDNDLHERQIVLLADKNDALETHIEQQLR
HHHHCCCHHCCCEECCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHH
ELTLLPLNIRRISLQAFQKEGCPRGVALIVTPYATPLPLFSPPLIHADRALTEHQQQQIR
HHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KILES
HHHCC
>Mature Secondary Structure
MMPTIAPPSVLSAPQRRCQVLLTLFQPEPIATVEIFSALNGVDDDTAREDITDTSLEIQR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHH
YHRLAITTCQNGCYRIEGTALDQRLCLLHWLRRGLRLCPTFVTQQFTPALKNALKQRGIA
HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
RPLYDDINLHALINLCARRLQKPFEHRDVQFLRLFLQYCLLQHHAGITPEFNPVQQIWAQ
CCHHHCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SCAEYPLAQEIGRHWQRHVMQAAPLNEALFMALLFSMIRLPDPIRDTHQRAQQLRLEVAR
HHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVLRFREKGNVRFSDEQGLNDQLYVHLAQALNRSLFTIGIDNTLPEEFNRLYPRLVRTTR
HHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHH
EALAGFEAEYGIHFSEEETGLVAVIFGAWLMQDNDLHERQIVLLADKNDALETHIEQQLR
HHHHCCCHHCCCEECCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHH
ELTLLPLNIRRISLQAFQKEGCPRGVALIVTPYATPLPLFSPPLIHADRALTEHQQQQIR
HHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KILES
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]