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The map label for this gene is yfiC [H]

Identifier: 29140802

GI number: 29140802

Start: 306474

End: 307211

Strand: Direct

Name: yfiC [H]

Synonym: t0268

Alternate gene names: 29140802

Gene position: 306474-307211 (Clockwise)

Preceding gene: 29140799

Following gene: 29140804

Centisome position: 6.4

GC content: 53.66

Gene sequence:

>738_bases
ATGTCTCAGTCTGGCTCCGTTCTTCGTCGTAACGGATTTACGTTTAAACAGTTTTTTGTCGCACACGATCGGTGTGCGAT
GAAAGTGGGAACTGACGGTATTTTACTCGGGGCGTGGGCGCCGGTCGCGGATGTAAAGCGAATTCTGGATATCGGTACTG
GAAGCGGTCTGCTGGCGTTAATGCTGGCGCAGCGGACGGATGACAGTGTGCCTGTTGACGCCGTGGAACTGGATGCCGGG
GCTGCCATGCAAGCGCAGGAAAACGTGGCTCACTCTCCATGGCCGCATCGAATAACGGTGCATACTGACGATATTCAGCG
TTGGGCGCCTCGCCAGACGGTACGCTTTGATCTTATTATCAGCAACCCGCCTTATTACGAACCCGGTGTGGAATGCTCCA
CGCCGCAGCGGGAGCAGGCGCGTTACACCGCTACGCTGGATCACCAGACGTTATTGGCTATTGCGGCGGATTGTATTACC
GAAGATGGCTTTTTTTGCGTAGTCTTGCCGGAACAAATAGGTAACGCTTTTACGCAGCAAGCGCTCAACATGGGATGGCA
TTTGCGGTTACGTACTGACGTTGCGGAAAACGAAGCGCGCTTGCCGCACCGGGTTTTGCTCGCATTCTCCCCGCAAGCCG
GGGAGTGCTTTAGCGACAGATTAGTAATTCGCGGGTCAGACCAGAATTATTCTGAAAGTTATACGGCGCTGACCCAGGCA
TTTTATCTGTTTATGTGA

Upstream 100 bases:

>100_bases
AGACGTTACGGCCGCAATCTTCATCTGTTTGTATGGATATCCCTTCTCAGGTATTGTTTTCACTCGGCGCTGTCGCCGTT
TTTTGCAAGGTTGTTTTTAC

Downstream 100 bases:

>100_bases
GGCGTTAACGGCGAAAGGATCGATGGGCCTGATTCAGCCAGTTGTTGCGGATAATCCAGCGTAAAGTGCAGCCCCCGGCT
CTCTTTACGCATCATCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAG
AAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECSTPQREQARYTATLDHQTLLAIAADCIT
EDGFFCVVLPEQIGNAFTQQALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQNYSESYTALTQA
FYLFM

Sequences:

>Translated_245_residues
MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAG
AAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECSTPQREQARYTATLDHQTLLAIAADCIT
EDGFFCVVLPEQIGNAFTQQALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQNYSESYTALTQA
FYLFM
>Mature_244_residues
SQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAGA
AMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECSTPQREQARYTATLDHQTLLAIAADCITE
DGFFCVVLPEQIGNAFTQQALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQNYSESYTALTQAF
YLFM

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val) [H]

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI87082131, Length=245, Percent_Identity=85.3061224489796, Blast_Score=439, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007848
- InterPro:   IPR022882 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.55 [H]

Molecular weight: Translated: 27259; Mature: 27128

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLAL
CCCCCCEEECCCCCHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCHHHHH
MLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLII
HHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEE
SNPPYYEPGVECSTPQREQARYTATLDHQTLLAIAADCITEDGFFCVVLPEQIGNAFTQQ
CCCCCCCCCCCCCCCCHHHCEEEEECCHHHHHHHHHHHHCCCCEEEEECHHHHCHHHHHH
ALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQNYSESYTALTQA
HHCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
FYLFM
HHHCC
>Mature Secondary Structure 
SQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLAL
CCCCCEEECCCCCHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHHHCCCCCHHHHH
MLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLII
HHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEE
SNPPYYEPGVECSTPQREQARYTATLDHQTLLAIAADCITEDGFFCVVLPEQIGNAFTQQ
CCCCCCCCCCCCCCCCHHHCEEEEECCHHHHHHHHHHHHCCCCEEEEECHHHHCHHHHHH
ALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQNYSESYTALTQA
HHCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
FYLFM
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA