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The map label for this gene is yfiM [H]

Identifier: 29140792

GI number: 29140792

Start: 294871

End: 295194

Strand: Reverse

Name: yfiM [H]

Synonym: t0257

Alternate gene names: 29140792

Gene position: 295194-294871 (Counterclockwise)

Preceding gene: 29140793

Following gene: 29140788

Centisome position: 6.16

GC content: 55.86

Gene sequence:

>324_bases
GTGCGCGTGTTGATTCCTTTTACGGTGTTGTTTCTCTCCGGGTGCAGCCATCTGGCTAACGACCACTGGAGCGGTCAGGA
TAAAGCCCAGCATTTTATGGCATCAGCGATGCTATCGGCAGCCGGTAATGAGTATGCGCGTCACCAGGGAGTAAGCCCTG
ACCGCAGCGCAGCGATAGGGCTGATGTTTTCTTTGAGTCTCGGAGCCTCAAAAGAACTCTGGGACAGCCGCCCGGAAGGC
AGCGGCTGGAGCTGGAAAGATTTTGTCTGGGATGTCGCTGGCGCGACAACCGGTTACGCTATCTGGCAAATGGCGCGATA
CTAA

Upstream 100 bases:

>100_bases
TGATTCGCCGTCTGCGCCGGATCCGCATCGACAGATTAATTAGCCGTATCCTGTAATCGAAGCCCCGTCCTGTACGGGGT
TTTCTCTTAGGAGTGAACTG

Downstream 100 bases:

>100_bases
AGGCGTAAGCCCTTTCCTTTACGGTGCAACATCAACGAAACCAGGAAAGCCAGAACGGCCATCGCGGTAACATACCAGAA
GAACGAACTCTCCATACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRVLIPFTVLFLSGCSHLANDHWSGQDKAQHFMASAMLSAAGNEYARHQGVSPDRSAAIGLMFSLSLGASKELWDSRPEG
SGWSWKDFVWDVAGATTGYAIWQMARY

Sequences:

>Translated_107_residues
MRVLIPFTVLFLSGCSHLANDHWSGQDKAQHFMASAMLSAAGNEYARHQGVSPDRSAAIGLMFSLSLGASKELWDSRPEG
SGWSWKDFVWDVAGATTGYAIWQMARY
>Mature_107_residues
MRVLIPFTVLFLSGCSHLANDHWSGQDKAQHFMASAMLSAAGNEYARHQGVSPDRSAAIGLMFSLSLGASKELWDSRPEG
SGWSWKDFVWDVAGATTGYAIWQMARY

Specific function: Unknown

COG id: COG5544

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693173, Length=107, Percent_Identity=76.6355140186916, Blast_Score=178, Evalue=7e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018736
- InterPro:   IPR017028 [H]

Pfam domain/function: PF10043 DUF2279 [H]

EC number: NA

Molecular weight: Translated: 11798; Mature: 11798

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIPFTVLFLSGCSHLANDHWSGQDKAQHFMASAMLSAAGNEYARHQGVSPDRSAAIG
CEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHH
LMFSLSLGASKELWDSRPEGSGWSWKDFVWDVAGATTGYAIWQMARY
HHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRVLIPFTVLFLSGCSHLANDHWSGQDKAQHFMASAMLSAAGNEYARHQGVSPDRSAAIG
CEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHH
LMFSLSLGASKELWDSRPEGSGWSWKDFVWDVAGATTGYAIWQMARY
HHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2002065; 2118499; 7567469 [H]