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The map label for this gene is yadS [H]

Identifier: 29140746

GI number: 29140746

Start: 237608

End: 238231

Strand: Reverse

Name: yadS [H]

Synonym: t0206

Alternate gene names: 29140746

Gene position: 238231-237608 (Counterclockwise)

Preceding gene: 29140747

Following gene: 29140743

Centisome position: 4.97

GC content: 57.05

Gene sequence:

>624_bases
ATGCTCGTCTATTGGCTGGATATTGTAGGCACGGCTGTATTTGCTATCTCTGGCGTGTTGCTGGCCGGGAAATTACGTAT
GGACCCGTTCGGCGTCCTGGTGCTCGGCGTCGTTACTGCCGTCGGCGGCGGGACAATCCGCGATATGGCGCTGGATAACG
GCCCGGTATTCTGGGTTAAAGATCCTACCGACCTGGTCGTCGCCATGGTCACCAGTATGCTGACCATCCTGCTGGTTCGC
CAGCCGAGACGTCTGCCGAAATGGATGTTGCCGGTACTGGATGCGGTCGGGCTGGCGGTGTTTGTCGGCATTGGGGTGAA
TAAAGCCTTCCTCGCTGAAACGGGGCCATTAGTGGCCGTCTGTATGGGCGTGATTACCGGCGTCGGCGGCGGGATTATTC
GCGATGTTCTGGCACGCGAGATCCCCATGATCCTACGCACCGAAATCTATGCCACGGCCTGTATTATCGGCGGGATTGTT
CACGCCACCGCGTTTTATACGTTTTCAGTACCGCTGGAAAGCGCTAGCATGATGGGCATGGTCGTCACGCTGTTTATTCG
GCTGGCGGCCATTCGCTGGCATTTGAAATTGCCGACGTTTGCCCTGGATGAAAACGGACGTTGA

Upstream 100 bases:

>100_bases
CGCAAGCCCGCGTATTATCCTCGCCGCAAAACAACTCTGTAATGCGCTTTCACAGGTGAATTAGAGCCTGTCTTACCAGG
CTCCTAGTGGGGATTCGACA

Downstream 100 bases:

>100_bases
TATTGTTTTGCCCGATGGCGCTACGCTTATCGGGCCTGGAACATCTTTCCTGTAGGCCGGATAAGACGCTCGCGTCGCCA
TCCGGCACAACGAACAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKDPTDLVVAMVTSMLTILLVR
QPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAFYTFSVPLESASMMGMVVTLFIRLAAIRWHLKLPTFALDENGR

Sequences:

>Translated_207_residues
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKDPTDLVVAMVTSMLTILLVR
QPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAFYTFSVPLESASMMGMVVTLFIRLAAIRWHLKLPTFALDENGR
>Mature_207_residues
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVKDPTDLVVAMVTSMLTILLVR
QPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAFYTFSVPLESASMMGMVVTLFIRLAAIRWHLKLPTFALDENGR

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=207, Percent_Identity=96.1352657004831, Blast_Score=369, Evalue=1e-104,
Organism=Escherichia coli, GI87082304, Length=151, Percent_Identity=41.0596026490066, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22138; Mature: 22138

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVK
CEEEEHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCCEEHEEECCCCEEEEE
DPTDLVVAMVTSMLTILLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVAV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAFYTFSVPLESASMMGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH
VVTLFIRLAAIRWHLKLPTFALDENGR
HHHHHHHHHHHHHHEECCEEECCCCCC
>Mature Secondary Structure
MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPVFWVK
CEEEEHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCCCEEHEEECCCCEEEEE
DPTDLVVAMVTSMLTILLVRQPRRLPKWMLPVLDAVGLAVFVGIGVNKAFLAETGPLVAV
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAFYTFSVPLESASMMGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH
VVTLFIRLAAIRWHLKLPTFALDENGR
HHHHHHHHHHHHHHEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]