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The map label for this gene is ygfB

Identifier: 161486786

GI number: 161486786

Start: 3069002

End: 3069580

Strand: Reverse

Name: ygfB

Synonym: t2977

Alternate gene names: 161486786

Gene position: 3069580-3069002 (Counterclockwise)

Preceding gene: 29143330

Following gene: 29143326

Centisome position: 64.06

GC content: 53.89

Gene sequence:

>579_bases
ATGTCTATACAGAACGAAATGCCTGGTTACGACGAAATGAACCGGTTTTTGAATCAACAAGGGGCCGGTCTGACCCCGGC
TGAAATGCATGGTTTAATCAGCGGGATGATTTGCGGCGGCAACAACGACAGCTCATGGCAGCCGCTGTTGCATGACCTGA
CGAACGAAGGTCTGGCCTTCGGGCATGAGCTTGCTCAGGCGCTGCGCAAAATGCACGCGGCGACCAGCGACGCGCTGGAA
GACGACGGCTTTCTTTTTCAGCTTTATCTGCCTGAAGGCGACGATGTCAGCGTATTCGATCGCGCAGATGCATTAGCCGG
GTGGGTTAACCACTTTTTGCTTGGCCTCGGCGTAACGCAGCCTAAACTTGATAAAGTCACCGGCGAAACGGGTGAAGCGA
TTGACGACCTGCGTAATATTGCGCAGCTTGGTTATGATGAGAGCGAAGATCAGGAAGAGCTGGAGATGTCGCTCGAAGAG
ATCATCGAATATGTCCGTGTTGCGGCGCTGTTATGTCATGACACTTTCACGCGCCAACAGCCGACCGCGCCGGAAGTGCG
TAAACCGACGCTACACTAA

Upstream 100 bases:

>100_bases
CTATAGCTACCCTGGTGTGAAGATACAAGCCCTTTTCTGGTTCACCAGGGTCCAAAGTGGTAGCATATCATGAATATCCT
CCCTTTGATGACGAATGCTT

Downstream 100 bases:

>100_bases
GAAAAAACGAAATGGAGGCCATGTCATGACTCAGCAGGAATACCAACGCCGTCGCCAGGCATTACTGGCGCAAATGCAGC
CCGGCAGCGCCGCGCTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSIQNEMPGYDEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALE
DDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEE
IIEYVRVAALLCHDTFTRQQPTAPEVRKPTLH

Sequences:

>Translated_192_residues
MSIQNEMPGYDEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALE
DDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEE
IIEYVRVAALLCHDTFTRQQPTAPEVRKPTLH
>Mature_191_residues
SIQNEMPGYDEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAFGHELAQALRKMHAATSDALED
DGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEI
IEYVRVAALLCHDTFTRQQPTAPEVRKPTLH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family

Homologues:

Organism=Escherichia coli, GI87082182, Length=192, Percent_Identity=92.7083333333333, Blast_Score=352, Evalue=6e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3215_SALTI (Q8Z3W5)

Other databases:

- EMBL:   AL627277
- EMBL:   AE014613
- PIR:   AI0873
- RefSeq:   NP_457457.2
- RefSeq:   NP_806669.2
- ProteinModelPortal:   Q8Z3W5
- SMR:   Q8Z3W5
- GeneID:   1068591
- GeneID:   1249499
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t2977
- KEGG:   sty:STY3215
- HOGENOM:   HBG701093
- OMA:   ELMNDGQ
- ProtClustDB:   PRK01736
- BioCyc:   SENT209261:T2977-MONOMER
- BioCyc:   SENT220341:STY3215-MONOMER
- HAMAP:   MF_00346
- InterPro:   IPR011978
- TIGRFAMs:   TIGR02292

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 21258; Mature: 21127

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQNEMPGYDEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAF
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCHHHH
GHELAQALRKMHAATSDALEDDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEIIEYVRVAALLCHDTFTRQQ
CHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTAPEVRKPTLH
CCCCCCCCCCCC
>Mature Secondary Structure 
SIQNEMPGYDEMNRFLNQQGAGLTPAEMHGLISGMICGGNNDSSWQPLLHDLTNEGLAF
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCHHHH
GHELAQALRKMHAATSDALEDDGFLFQLYLPEGDDVSVFDRADALAGWVNHFLLGLGVTQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PKLDKVTGETGEAIDDLRNIAQLGYDESEDQEELEMSLEEIIEYVRVAALLCHDTFTRQQ
CHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTAPEVRKPTLH
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504