| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28378958
Identifier: 28378958
GI number: 28378958
Start: 2155706
End: 2156068
Strand: Direct
Name: 28378958
Synonym: lp_2391
Alternate gene names: NA
Gene position: 2155706-2156068 (Clockwise)
Preceding gene: 28378953
Following gene: 28378963
Centisome position: 65.16
GC content: 39.39
Gene sequence:
>363_bases ATGAGTGTAAATTTAGCAAAGGACTGGTTTGTCGTGGCTAGTAATTCAGATTCAATTTATAACGTCATGTTCTATATCAC CCATCACCCGACTGAAATTCAGTTTACCCAACCGGAATACACGAATGTCGTTCGGATGGGTGTTCCCGATCATATTAAGG TCGCTAACCCCGAAATTTATTTTCCTGACAACAAGCTATTAGTCAACCGATTTCAGGATGACTTTGTCGCTAAAAACGGC AACTTACTTGATTTCTTCTTCGATTACACAGAGAAAAAAGTCCCTAACTACCATGAAGTGTGGGTTTCTTCGGCCCATTT ACCAGCCAAACACTTATACTTCTTAGAGTTATCATTTGAGTAA
Upstream 100 bases:
>100_bases AATTAATTAATTTGAATTTAATTAAAAGATTAATGGTTAATTAGAAGTTTGTCAAGGGGCCCGTCAAACATTTCCAACGC TTTAAGATTTTTTTGGTATA
Downstream 100 bases:
>100_bases TTTAACGCACGTAACCTTTACGGTCTATTTGGAATCAAATTTAAAATGGATCAATCAAAAAATCACCACCTGGATTATGT TCATCCAGGTGGTGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSVNLAKDWFVVASNSDSIYNVMFYITHHPTEIQFTQPEYTNVVRMGVPDHIKVANPEIYFPDNKLLVNRFQDDFVAKNG NLLDFFFDYTEKKVPNYHEVWVSSAHLPAKHLYFLELSFE
Sequences:
>Translated_120_residues MSVNLAKDWFVVASNSDSIYNVMFYITHHPTEIQFTQPEYTNVVRMGVPDHIKVANPEIYFPDNKLLVNRFQDDFVAKNG NLLDFFFDYTEKKVPNYHEVWVSSAHLPAKHLYFLELSFE >Mature_119_residues SVNLAKDWFVVASNSDSIYNVMFYITHHPTEIQFTQPEYTNVVRMGVPDHIKVANPEIYFPDNKLLVNRFQDDFVAKNGN LLDFFFDYTEKKVPNYHEVWVSSAHLPAKHLYFLELSFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14136; Mature: 14005
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNLAKDWFVVASNSDSIYNVMFYITHHPTEIQFTQPEYTNVVRMGVPDHIKVANPEIY CCCCCCCCEEEEECCCCCEEEEEEEEEECCCEEEEECCCCCCEEEECCCCCEEECCCEEE FPDNKLLVNRFQDDFVAKNGNLLDFFFDYTEKKVPNYHEVWVSSAHLPAKHLYFLELSFE ECCCEEEEEECCCCEECCCCCEEEEEECCHHHCCCCHHHEEEECCCCCCCEEEEEEEECC >Mature Secondary Structure SVNLAKDWFVVASNSDSIYNVMFYITHHPTEIQFTQPEYTNVVRMGVPDHIKVANPEIY CCCCCCCEEEEECCCCCEEEEEEEEEECCCEEEEECCCCCCEEEECCCCCEEECCCEEE FPDNKLLVNRFQDDFVAKNGNLLDFFFDYTEKKVPNYHEVWVSSAHLPAKHLYFLELSFE ECCCEEEEEECCCCEECCCCCEEEEEECCHHHCCCCHHHEEEECCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA