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The map label for this gene is 28378919

Identifier: 28378919

GI number: 28378919

Start: 2115699

End: 2116181

Strand: Direct

Name: 28378919

Synonym: lp_2340

Alternate gene names: NA

Gene position: 2115699-2116181 (Clockwise)

Preceding gene: 28378918

Following gene: 28378952

Centisome position: 63.95

GC content: 44.93

Gene sequence:

>483_bases
ATGTTACAACAATACCAACACATTTTAGTTCCTGTTGATGGTTCTTATGAAGCGGAATTAGCATTTAAAAAGGCGGTTGC
CGTCGCGAAACGGAACGGACCTAACGCCTCAGTTCACATGGTCCACGTGGTTGATACCCGTGCTTTCCAAAACATTTCTA
GTTTTGATACGACCATGGTTGAACAAGTGACCGATACTGCTCAAAAAACGTTGGACAAGTACGTTGCAGAAGCTAAGGCG
GACGGCTTAGATAACGTGGATTATTCGATTGAATATGGCGCACCTAAGACGATTATTGCGCGCGACGTTCCTAAGGATAT
GGGCATCGATTTAATTATGATTGGCGCAACTGGTCTCAACGCGGTTGAACGCTTATTGATCGGGTCAGTCACCGAATATG
TCACTCGGATGGCTGTTTGTGACGTTCTCGTTGTCCGGACTGACTTGGAAAATAAGCCAGCTCCTAAACCAAAGAAAAAG
TAA

Upstream 100 bases:

>100_bases
ACTAATTTTAGTGAGTTTCATGCAAATCTCATAGAAAACGCTTTTTATTTTTTGCGAAAACCTTTACAATATAGTTATAA
AGTAATGAGGGGTGAGAATG

Downstream 100 bases:

>100_bases
TCTTTTGATACACGTACAATAAAAATCGGCTCAGTGAAGTTACTTACCTCACTGGCCGATTTTTTACTATTTGCAAAAAT
CATACCGCTTACTGCTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLQQYQHILVPVDGSYEAELAFKKAVAVAKRNGPNASVHMVHVVDTRAFQNISSFDTTMVEQVTDTAQKTLDKYVAEAKA
DGLDNVDYSIEYGAPKTIIARDVPKDMGIDLIMIGATGLNAVERLLIGSVTEYVTRMAVCDVLVVRTDLENKPAPKPKKK

Sequences:

>Translated_160_residues
MLQQYQHILVPVDGSYEAELAFKKAVAVAKRNGPNASVHMVHVVDTRAFQNISSFDTTMVEQVTDTAQKTLDKYVAEAKA
DGLDNVDYSIEYGAPKTIIARDVPKDMGIDLIMIGATGLNAVERLLIGSVTEYVTRMAVCDVLVVRTDLENKPAPKPKKK
>Mature_160_residues
MLQQYQHILVPVDGSYEAELAFKKAVAVAKRNGPNASVHMVHVVDTRAFQNISSFDTTMVEQVTDTAQKTLDKYVAEAKA
DGLDNVDYSIEYGAPKTIIARDVPKDMGIDLIMIGATGLNAVERLLIGSVTEYVTRMAVCDVLVVRTDLENKPAPKPKKK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 17551; Mature: 17551

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQYQHILVPVDGSYEAELAFKKAVAVAKRNGPNASVHMVHVVDTRAFQNISSFDTTMV
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHH
EQVTDTAQKTLDKYVAEAKADGLDNVDYSIEYGAPKTIIARDVPKDMGIDLIMIGATGLN
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHCCCCEEEECCCCHH
AVERLLIGSVTEYVTRMAVCDVLVVRTDLENKPAPKPKKK
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLQQYQHILVPVDGSYEAELAFKKAVAVAKRNGPNASVHMVHVVDTRAFQNISSFDTTMV
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHH
EQVTDTAQKTLDKYVAEAKADGLDNVDYSIEYGAPKTIIARDVPKDMGIDLIMIGATGLN
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEECCCCHHCCCCEEEECCCCHH
AVERLLIGSVTEYVTRMAVCDVLVVRTDLENKPAPKPKKK
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA