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The map label for this gene is 28378649

Identifier: 28378649

GI number: 28378649

Start: 1815575

End: 1815814

Strand: Direct

Name: 28378649

Synonym: lp_2014

Alternate gene names: NA

Gene position: 1815575-1815814 (Clockwise)

Preceding gene: 28378648

Following gene: 28378657

Centisome position: 54.88

GC content: 47.5

Gene sequence:

>240_bases
TTGGCGCAACATGAGGTAACTCGTAGCATGCCACAACCAGGAACGCCATATGATAACGCACCAATGGAAGGTTGGTGGAA
CGAGTTCAAATTGCGTTGGATGGACCGACATGTCAAACCAGCTACCTATCAAGAATTAGTGCCCTTAGTTGAAGAAGGCA
TCAACTACTTTAATCAGCTAGACCGTTCACCAGCAAGAAACGACCTCACCCCAGCGGAATACTGGAATGAGGCCGTTTAA

Upstream 100 bases:

>100_bases
CAGGTTTTTCAACGGGCCTTTAATTTTGCGGGTGACGTCCACCCTGTAGTGCATACTGGCCGAGGTTCGGCATACACATC
GGTAGTATTCAATAATTTTT

Downstream 100 bases:

>100_bases
GTAGAGCAAAACTTATATTATTTCAAATGACAATTTGACAGGTACTAGTACACTATCAGTTCGGCTTTTCGTCTTCGTCA
GTTTTCAGAACCGCCATGAA

Product: transposase, fragment

Products: NA

Alternate protein names: Transposase Fragment; Integrase Catalytic Domain-Containing Protein; Integrase Catalytic Subunit

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MAQHEVTRSMPQPGTPYDNAPMEGWWNEFKLRWMDRHVKPATYQELVPLVEEGINYFNQLDRSPARNDLTPAEYWNEAV

Sequences:

>Translated_79_residues
MAQHEVTRSMPQPGTPYDNAPMEGWWNEFKLRWMDRHVKPATYQELVPLVEEGINYFNQLDRSPARNDLTPAEYWNEAV
>Mature_78_residues
AQHEVTRSMPQPGTPYDNAPMEGWWNEFKLRWMDRHVKPATYQELVPLVEEGINYFNQLDRSPARNDLTPAEYWNEAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9365; Mature: 9233

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQHEVTRSMPQPGTPYDNAPMEGWWNEFKLRWMDRHVKPATYQELVPLVEEGINYFNQL
CCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
DRSPARNDLTPAEYWNEAV
CCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
AQHEVTRSMPQPGTPYDNAPMEGWWNEFKLRWMDRHVKPATYQELVPLVEEGINYFNQL
CCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
DRSPARNDLTPAEYWNEAV
CCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA