Click here to switch to the map view.

The map label for this gene is 28378637

Identifier: 28378637

GI number: 28378637

Start: 1807172

End: 1807984

Strand: Direct

Name: 28378637

Synonym: lp_2000

Alternate gene names: NA

Gene position: 1807172-1807984 (Clockwise)

Preceding gene: 28378636

Following gene: 28378639

Centisome position: 54.63

GC content: 33.21

Gene sequence:

>813_bases
ATGCTCAATATATTTAGTTTGATCATCAGCATTATTAGCTTAATTTCATCCATAATTATCGCTATTAGACAAAATAAACA
AACGAACAACTCAACCAAAATAGCAAACCAAGGAAATAACCTAACAAATGCTGGAAACAACATCGCAAACTATTCTGCAA
ATGTGCAAATAAAAGAATTAGCCCCTATTTTATTTAATACAAGCCAAGATTTTCAAACTGCCCCAGCATCTACTGCAAGT
AACGCGTATAGTACTACCTTAAAAGTAACTGGTTATTTAACAACAACTTTTGGAAGCATTAGTTGGATAGGCACACTTGT
TCCCAATTATTTTCCTGCTTATTCATTCGATGCTACCAACATATCCCAAAGTGCTTCTACTAATAAAAACAACAGCTACT
TTGACACGACTTTCACTATAACTCGCACTGAAACTGTAGACAACTTTATTCGTTCCAGAGTATATATCTGTACATTGGAT
AGCAACTTCAATATATCTATTAATCTCATACAACTAATTGTGGAGCGCCTTTCAGAATCTAGTATACGAGAAGTAATAGT
GGATTCTTCCCCAGACGGACCTTATCATTTTAAAGCAGTTGATGGTTTTTATCGCTGTTTTACCGAATATGAATTACTGA
CGTATAAAACGTTAAGATTGATTAAACCATGGATAGACTCAAAAAGCTCAGGGAGTATGAGTCTCAAATCTCAAGAAAAA
ATATCCACTATTTTTGAAGATAATGAGCCATTCAACTTGATTCAAAATGAATTAAAAGAAATACGATCTCATATTACTAG
TGTAACAGGATAA

Upstream 100 bases:

>100_bases
TACCGATGATGATCTAGCTGAAATGCAAACTCTAATCTCAGACCGTCATAAATTTTTAAAAGAAAACAGTTAGGTTTAAT
ACCTAGGCATAGGAGAAAAA

Downstream 100 bases:

>100_bases
TAAAAAAATCCCACACCGGCCAATTAAGCTAGTGCGGGATTCGTTTTTATTTAATTATTGTGTTTTTTTATAATAACAAA
CCAGATAATCTGAGCGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLNIFSLIISIISLISSIIIAIRQNKQTNNSTKIANQGNNLTNAGNNIANYSANVQIKELAPILFNTSQDFQTAPASTAS
NAYSTTLKVTGYLTTTFGSISWIGTLVPNYFPAYSFDATNISQSASTNKNNSYFDTTFTITRTETVDNFIRSRVYICTLD
SNFNISINLIQLIVERLSESSIREVIVDSSPDGPYHFKAVDGFYRCFTEYELLTYKTLRLIKPWIDSKSSGSMSLKSQEK
ISTIFEDNEPFNLIQNELKEIRSHITSVTG

Sequences:

>Translated_270_residues
MLNIFSLIISIISLISSIIIAIRQNKQTNNSTKIANQGNNLTNAGNNIANYSANVQIKELAPILFNTSQDFQTAPASTAS
NAYSTTLKVTGYLTTTFGSISWIGTLVPNYFPAYSFDATNISQSASTNKNNSYFDTTFTITRTETVDNFIRSRVYICTLD
SNFNISINLIQLIVERLSESSIREVIVDSSPDGPYHFKAVDGFYRCFTEYELLTYKTLRLIKPWIDSKSSGSMSLKSQEK
ISTIFEDNEPFNLIQNELKEIRSHITSVTG
>Mature_270_residues
MLNIFSLIISIISLISSIIIAIRQNKQTNNSTKIANQGNNLTNAGNNIANYSANVQIKELAPILFNTSQDFQTAPASTAS
NAYSTTLKVTGYLTTTFGSISWIGTLVPNYFPAYSFDATNISQSASTNKNNSYFDTTFTITRTETVDNFIRSRVYICTLD
SNFNISINLIQLIVERLSESSIREVIVDSSPDGPYHFKAVDGFYRCFTEYELLTYKTLRLIKPWIDSKSSGSMSLKSQEK
ISTIFEDNEPFNLIQNELKEIRSHITSVTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30181; Mature: 30181

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIFSLIISIISLISSIIIAIRQNKQTNNSTKIANQGNNLTNAGNNIANYSANVQIKEL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEHHHH
APILFNTSQDFQTAPASTASNAYSTTLKVTGYLTTTFGSISWIGTLVPNYFPAYSFDATN
HHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC
ISQSASTNKNNSYFDTTFTITRTETVDNFIRSRVYICTLDSNFNISINLIQLIVERLSES
CCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHCEEEEEEECCCCCEEHHHHHHHHHHHHHH
SIREVIVDSSPDGPYHFKAVDGFYRCFTEYELLTYKTLRLIKPWIDSKSSGSMSLKSQEK
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
ISTIFEDNEPFNLIQNELKEIRSHITSVTG
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNIFSLIISIISLISSIIIAIRQNKQTNNSTKIANQGNNLTNAGNNIANYSANVQIKEL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEHHHH
APILFNTSQDFQTAPASTASNAYSTTLKVTGYLTTTFGSISWIGTLVPNYFPAYSFDATN
HHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCC
ISQSASTNKNNSYFDTTFTITRTETVDNFIRSRVYICTLDSNFNISINLIQLIVERLSES
CCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHCEEEEEEECCCCCEEHHHHHHHHHHHHHH
SIREVIVDSSPDGPYHFKAVDGFYRCFTEYELLTYKTLRLIKPWIDSKSSGSMSLKSQEK
HHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
ISTIFEDNEPFNLIQNELKEIRSHITSVTG
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA