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The map label for this gene is 28378595

Identifier: 28378595

GI number: 28378595

Start: 1765902

End: 1766570

Strand: Direct

Name: 28378595

Synonym: lp_1949

Alternate gene names: NA

Gene position: 1765902-1766570 (Clockwise)

Preceding gene: 28378594

Following gene: 28378597

Centisome position: 53.38

GC content: 42.3

Gene sequence:

>669_bases
TTGAAATCGTCATTGAAAAAATTCATTAAACACTTTGGAGTCCTCGTAATTGGTATCCTGTGCATGTCAGCTGGCGTCGC
ACTCTCTAAATTATCCTTATTAGGAACGTCCCCAATTTCAAGTATTCCGAATGTCATTAGCAATATTACGGCAATTCCAA
TTGGCCAGTTGACAATTGCTTTTATTTTCATTTTAGTTCTACTAGAAGCCATCGTTTTGCGCCGGCAGTTCTCCTGGCAA
AACTTATTGCAATTAATTCCGGGTAGCCTGTTCGGTTGGTTCATCGATGCTTTTGTGCGGTTTTTCCATAGTCTTCCTAA
TCAAACATACATCGAGCAACTCGGACTTGTCTTAATGGGAACGGTGCTCTTATCGTTAGGTGTCTTTTTAGAAGTCAATT
CACACGCCATTATCATGCCTGGTGAAGGACTTCCGAACGCCATCGCACTGATGCATCAACTCAAGTTTGCCAAAGTCAAA
GTTTATAATGATTTCATTCTGATTGGCATTTCACTAGTCCTGGCACTCAGCTTTACTCATTCTTTAGCGGGGGTTCGGGA
AGGTACCCTCATTGCAGCCTTTTTAACTGGGCGACTCGTAAATTTCTTTACCGAACATGCAAATCGATTTGTTGCTTGGA
TGACACCAGCCGCTGACGCGAACAACTAA

Upstream 100 bases:

>100_bases
ACTGGTGGCATGACTTCTTCGCTGCTCATCCAGAAGTCAACGAGCAAGTGTTTACGAACCAATTACAACAAGTTTACCTC
GCCTTACAAGAGAAAAGAGA

Downstream 100 bases:

>100_bases
TTTCCAGAATTATCAAATAAAAACACGGTCACTGGCTAGTGATCGTGTTTTTTGGCTTGTGTTCACGCCAATTCGTTAGT
CTGCCAGTGCCCGAATTCTT

Product: integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKSSLKKFIKHFGVLVIGILCMSAGVALSKLSLLGTSPISSIPNVISNITAIPIGQLTIAFIFILVLLEAIVLRRQFSWQ
NLLQLIPGSLFGWFIDAFVRFFHSLPNQTYIEQLGLVLMGTVLLSLGVFLEVNSHAIIMPGEGLPNAIALMHQLKFAKVK
VYNDFILIGISLVLALSFTHSLAGVREGTLIAAFLTGRLVNFFTEHANRFVAWMTPAADANN

Sequences:

>Translated_222_residues
MKSSLKKFIKHFGVLVIGILCMSAGVALSKLSLLGTSPISSIPNVISNITAIPIGQLTIAFIFILVLLEAIVLRRQFSWQ
NLLQLIPGSLFGWFIDAFVRFFHSLPNQTYIEQLGLVLMGTVLLSLGVFLEVNSHAIIMPGEGLPNAIALMHQLKFAKVK
VYNDFILIGISLVLALSFTHSLAGVREGTLIAAFLTGRLVNFFTEHANRFVAWMTPAADANN
>Mature_222_residues
MKSSLKKFIKHFGVLVIGILCMSAGVALSKLSLLGTSPISSIPNVISNITAIPIGQLTIAFIFILVLLEAIVLRRQFSWQ
NLLQLIPGSLFGWFIDAFVRFFHSLPNQTYIEQLGLVLMGTVLLSLGVFLEVNSHAIIMPGEGLPNAIALMHQLKFAKVK
VYNDFILIGISLVLALSFTHSLAGVREGTLIAAFLTGRLVNFFTEHANRFVAWMTPAADANN

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24280; Mature: 24280

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLKKFIKHFGVLVIGILCMSAGVALSKLSLLGTSPISSIPNVISNITAIPIGQLTIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHH
FIFILVLLEAIVLRRQFSWQNLLQLIPGSLFGWFIDAFVRFFHSLPNQTYIEQLGLVLMG
HHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TVLLSLGVFLEVNSHAIIMPGEGLPNAIALMHQLKFAKVKVYNDFILIGISLVLALSFTH
HHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAGVREGTLIAAFLTGRLVNFFTEHANRFVAWMTPAADANN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure
MKSSLKKFIKHFGVLVIGILCMSAGVALSKLSLLGTSPISSIPNVISNITAIPIGQLTIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHH
FIFILVLLEAIVLRRQFSWQNLLQLIPGSLFGWFIDAFVRFFHSLPNQTYIEQLGLVLMG
HHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TVLLSLGVFLEVNSHAIIMPGEGLPNAIALMHQLKFAKVKVYNDFILIGISLVLALSFTH
HHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLAGVREGTLIAAFLTGRLVNFFTEHANRFVAWMTPAADANN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA