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The map label for this gene is 28378594

Identifier: 28378594

GI number: 28378594

Start: 1765438

End: 1765905

Strand: Direct

Name: 28378594

Synonym: lp_1948

Alternate gene names: NA

Gene position: 1765438-1765905 (Clockwise)

Preceding gene: 28378593

Following gene: 28378595

Centisome position: 53.36

GC content: 44.44

Gene sequence:

>468_bases
ATGGACTTGTCCACTATTTATAAAAAAGGAGTGCTGACTATCGAGTATTTTAGTCTAACTAAATATATTGCGGGTATTTA
CCGCGAATCCAAAAACAGCATCAACACCCAACTACAGGCGCTGAACATTCGGGCGACCGAAAGTGACTTATTACTGGTTG
TTTACGATCACCCGGCCCAAACTCAAAAGGACTTGGCTGCCAGTCTGATGCTCGATCCTAGTTTATTAGCTCGAACTGTT
CGTCAACTTGAGCAACGCCAACTCGTCATCCGGTTTCGTGATCCTGCCGATCAGCGTAGTCTACGAATTAGCTTGACACC
GGCTGGTGAACAAATCGCTATCGCCATTAAGAAAACATTGATTGACTGGTGGCATGACTTCTTCGCTGCTCATCCAGAAG
TCAACGAGCAAGTGTTTACGAACCAATTACAACAAGTTTACCTCGCCTTACAAGAGAAAAGAGATTGA

Upstream 100 bases:

>100_bases
CCAACTGATGATCAGGGCCGTCCATATCCACTATTAACTATGACTTACAACTGTGACCCGTTAAACGACTGACTTGACAA
GGTCGTTTTTTTTATAAATA

Downstream 100 bases:

>100_bases
AATCGTCATTGAAAAAATTCATTAAACACTTTGGAGTCCTCGTAATTGGTATCCTGTGCATGTCAGCTGGCGTCGCACTC
TCTAAATTATCCTTATTAGG

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDLSTIYKKGVLTIEYFSLTKYIAGIYRESKNSINTQLQALNIRATESDLLLVVYDHPAQTQKDLAASLMLDPSLLARTV
RQLEQRQLVIRFRDPADQRSLRISLTPAGEQIAIAIKKTLIDWWHDFFAAHPEVNEQVFTNQLQQVYLALQEKRD

Sequences:

>Translated_155_residues
MDLSTIYKKGVLTIEYFSLTKYIAGIYRESKNSINTQLQALNIRATESDLLLVVYDHPAQTQKDLAASLMLDPSLLARTV
RQLEQRQLVIRFRDPADQRSLRISLTPAGEQIAIAIKKTLIDWWHDFFAAHPEVNEQVFTNQLQQVYLALQEKRD
>Mature_155_residues
MDLSTIYKKGVLTIEYFSLTKYIAGIYRESKNSINTQLQALNIRATESDLLLVVYDHPAQTQKDLAASLMLDPSLLARTV
RQLEQRQLVIRFRDPADQRSLRISLTPAGEQIAIAIKKTLIDWWHDFFAAHPEVNEQVFTNQLQQVYLALQEKRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17889; Mature: 17889

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSTIYKKGVLTIEYFSLTKYIAGIYRESKNSINTQLQALNIRATESDLLLVVYDHPAQ
CCHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHEEEEEEEEECCCCEEEEEECCCCC
TQKDLAASLMLDPSLLARTVRQLEQRQLVIRFRDPADQRSLRISLTPAGEQIAIAIKKTL
HHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHH
IDWWHDFFAAHPEVNEQVFTNQLQQVYLALQEKRD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLSTIYKKGVLTIEYFSLTKYIAGIYRESKNSINTQLQALNIRATESDLLLVVYDHPAQ
CCHHHHHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHEEEEEEEEECCCCEEEEEECCCCC
TQKDLAASLMLDPSLLARTVRQLEQRQLVIRFRDPADQRSLRISLTPAGEQIAIAIKKTL
HHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHH
IDWWHDFFAAHPEVNEQVFTNQLQQVYLALQEKRD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA