| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is glnPH1 [H]
Identifier: 28377653
GI number: 28377653
Start: 743457
End: 744893
Strand: Direct
Name: glnPH1 [H]
Synonym: lp_0802
Alternate gene names: 28377653
Gene position: 743457-744893 (Clockwise)
Preceding gene: 28377652
Following gene: 28377654
Centisome position: 22.47
GC content: 44.26
Gene sequence:
>1437_bases ATGAGAAAGTGGCAAGTTGCAGTTGTCATGTTGTTAGCAGCGTTGGGAAGCTGGTTTGCGATTGGTACCCAGGCCCAGGC TAAGACGTATACGATTGCGACGGATACAACCTTTGCGCCGTTCGAATTTCAGGTCAAGGGTGGTAAGTATAAGGGAATTG ATATCGATATTTTGAAGGCAATTGCCAAAAAAGAAAATTTCAATTATAAATTAAAAGCGCTTAGTTTCGGTGCCGCTGTT CAGCAGCTTAGTGCGAACCAAGTTGATGGGGTAATTGCCGGAATGAATATTACGGCTGAACGGAAGCAGACGTTTGATTT TTCAGACGCTTACTATACTTCCGGGGTGGTCATGGCTGTGGCTAAAGATAGCAAGGTCAAAACGTTTAAAGATTTGAAAG GTAAGACCGTGGCCCTTAAAACGGGGACAGCTGGTGCAACCTATGCGAAGTCGATTCAGAGCAAGTACGGCTTCAAAATC AAGTATTTCAATGACTCGAATAACATGTATAACGATGTTAAGGTCGGCAACTCGGCTGCTTGTTTTGAAGACTATCCCGT GATGTCATACGGAATCAAGAATGGCATCGCGTTGAAGATTGTTTCCAAGCAACACGAGGCCGGCGACTATGGTTTCGCGG TTAAAAAAGGTAAAAACGCGGAACTGTTAAAGAAATTTAACGCGGGTCTCAAAGCGATTAAAGCGGATGGTACTTACAAA AAGATCATTAACAAGTACTTGAAGTCTAGTGAAGCATCCTTAACGGGTGAAGACGCAAGCAGTCGGACCTTTATTGGCTT GTTCACCCAAAACTTGGATACGATTGGCTCAGGGTTATGGATGACCTTGGAATTAACGGTTATTTCAATTATTTTAGCGA CGATCCTCGGACTGATTCTTGGGGTCTTAGGCGTTATGCCGGGTAAACTTGGTCCGGCCATCTCCAGTACGATTATTTAT ATTTTCCGTGGGATGCCATTGATGGTGTTGGCCTTCTTTATTTACATTGGGTTCCCAGACCTGATTGGGCACGGCTTTAA GATTCCCGCGTTCGTTGCTGGGATGATTACGTTGATGCTTAACGAAGGGGCCTATACCGGAGCCTTTGTTAAGGGGGGCT TTGCCGCGGTCGACGATGGTCAAATGGAGGCGGCCCGTTCACTCGGGTTGCCATACTGGACGGCCATGCGCAAGGTTATT ATGCCCCAAGGAATTCGAATCATGATTCCGTCGTTCATTAACCAATTTATTATCACGTTGAAGGATACGTCAATTCTATC CGTTATTGGGATCGTTGAATTAACCCAAACTGGGACGTTGATTATTGCCCGGAACTTCGAAGGCTTTAAGATTTGGTTAA TGATTGCGATTATTTATCTGATTATCATTACGTTATTAACATGGTTATCTAACTGGGTTCAAAGGAGGATTAACTAA
Upstream 100 bases:
>100_bases AAATTAAAAAAGTATAAAAAATTGAATTGGTCGCGAGACATGAATTATGTTATATTTTATGACATACCGTTCCGGTAAAC TATTTGAGGAGGTCTCGTCG
Downstream 100 bases:
>100_bases GCATGGCGAAAGTAATTGTCAAAGATTTGCATAAAAGCTACGGCGATAACGAAGTCTTGAAAGGGTTAAACCTTGAAGTT CAAGATAACGAAGTAGTCTG
Product: glutamine ABC transporter, substrate binding and permease protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MRKWQVAVVMLLAALGSWFAIGTQAQAKTYTIATDTTFAPFEFQVKGGKYKGIDIDILKAIAKKENFNYKLKALSFGAAV QQLSANQVDGVIAGMNITAERKQTFDFSDAYYTSGVVMAVAKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFKI KYFNDSNNMYNDVKVGNSAACFEDYPVMSYGIKNGIALKIVSKQHEAGDYGFAVKKGKNAELLKKFNAGLKAIKADGTYK KIINKYLKSSEASLTGEDASSRTFIGLFTQNLDTIGSGLWMTLELTVISIILATILGLILGVLGVMPGKLGPAISSTIIY IFRGMPLMVLAFFIYIGFPDLIGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVI MPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTGTLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRIN
Sequences:
>Translated_478_residues MRKWQVAVVMLLAALGSWFAIGTQAQAKTYTIATDTTFAPFEFQVKGGKYKGIDIDILKAIAKKENFNYKLKALSFGAAV QQLSANQVDGVIAGMNITAERKQTFDFSDAYYTSGVVMAVAKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFKI KYFNDSNNMYNDVKVGNSAACFEDYPVMSYGIKNGIALKIVSKQHEAGDYGFAVKKGKNAELLKKFNAGLKAIKADGTYK KIINKYLKSSEASLTGEDASSRTFIGLFTQNLDTIGSGLWMTLELTVISIILATILGLILGVLGVMPGKLGPAISSTIIY IFRGMPLMVLAFFIYIGFPDLIGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVI MPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTGTLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRIN >Mature_478_residues MRKWQVAVVMLLAALGSWFAIGTQAQAKTYTIATDTTFAPFEFQVKGGKYKGIDIDILKAIAKKENFNYKLKALSFGAAV QQLSANQVDGVIAGMNITAERKQTFDFSDAYYTSGVVMAVAKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFKI KYFNDSNNMYNDVKVGNSAACFEDYPVMSYGIKNGIALKIVSKQHEAGDYGFAVKKGKNAELLKKFNAGLKAIKADGTYK KIINKYLKSSEASLTGEDASSRTFIGLFTQNLDTIGSGLWMTLELTVISIILATILGLILGVLGVMPGKLGPAISSTIIY IFRGMPLMVLAFFIYIGFPDLIGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVI MPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTGTLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRIN
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=241, Percent_Identity=41.49377593361, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1787030, Length=198, Percent_Identity=35.8585858585859, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1788226, Length=214, Percent_Identity=33.6448598130841, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1787085, Length=244, Percent_Identity=33.1967213114754, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=30, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787088, Length=245, Percent_Identity=31.0204081632653, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1788649, Length=258, Percent_Identity=29.4573643410853, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1788228, Length=221, Percent_Identity=28.5067873303167, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1786873, Length=213, Percent_Identity=23.943661971831, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87082239, Length=171, Percent_Identity=30.9941520467836, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=30.1369863013699, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=30.0469483568075, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786874, Length=223, Percent_Identity=27.8026905829596, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=29.4685990338164, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI48994930, Length=164, Percent_Identity=31.7073170731707, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 52271; Mature: 52271
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKWQVAVVMLLAALGSWFAIGTQAQAKTYTIATDTTFAPFEFQVKGGKYKGIDIDILKA CCCHHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCEECCEEEEECCCEECCCCHHHHHH IAKKENFNYKLKALSFGAAVQQLSANQVDGVIAGMNITAERKQTFDFSDAYYTSGVVMAV HHHCCCCCEEEEEEEHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCHHHCCCEEEEE AKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFKIKYFNDSNNMYNDVKVGNSAA ECCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCEEECCCCCC CFEDYPVMSYGIKNGIALKIVSKQHEAGDYGFAVKKGKNAELLKKFNAGLKAIKADGTYK CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEECCCHHH KIINKYLKSSEASLTGEDASSRTFIGLFTQNLDTIGSGLWMTLELTVISIILATILGLIL HHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCHHHHCCCEEEEHHHHHHHHHHHHHHHHHH GVLGVMPGKLGPAISSTIIYIFRGMPLMVLAFFIYIGFPDLIGHGFKIPAFVAGMITLML HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHC NEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITL CCCCCCCCEECCCEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHEEEE KDTSILSVIGIVELTQTGTLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRIN CCCHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKWQVAVVMLLAALGSWFAIGTQAQAKTYTIATDTTFAPFEFQVKGGKYKGIDIDILKA CCCHHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCEECCEEEEECCCEECCCCHHHHHH IAKKENFNYKLKALSFGAAVQQLSANQVDGVIAGMNITAERKQTFDFSDAYYTSGVVMAV HHHCCCCCEEEEEEEHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCHHHCCCEEEEE AKDSKVKTFKDLKGKTVALKTGTAGATYAKSIQSKYGFKIKYFNDSNNMYNDVKVGNSAA ECCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCEEECCCCCC CFEDYPVMSYGIKNGIALKIVSKQHEAGDYGFAVKKGKNAELLKKFNAGLKAIKADGTYK CCCCCCCHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCEEEECCCHHH KIINKYLKSSEASLTGEDASSRTFIGLFTQNLDTIGSGLWMTLELTVISIILATILGLIL HHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCHHHHCCCEEEEHHHHHHHHHHHHHHHHHH GVLGVMPGKLGPAISSTIIYIFRGMPLMVLAFFIYIGFPDLIGHGFKIPAFVAGMITLML HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHC NEGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITL CCCCCCCCEECCCEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHEEEE KDTSILSVIGIVELTQTGTLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRIN CCCHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]