| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is est [H]
Identifier: 28377649
GI number: 28377649
Start: 732496
End: 733245
Strand: Direct
Name: est [H]
Synonym: lp_0796
Alternate gene names: 28377649
Gene position: 732496-733245 (Clockwise)
Preceding gene: 28377648
Following gene: 28377650
Centisome position: 22.14
GC content: 45.33
Gene sequence:
>750_bases ATGATGCTGAAACAACCGGAACCGTTTTTCTTTGAACATGGCCAACATGCCGTCATTTTATTGCACGCCTATGCGGGAAG TGCCAATGATGTGCGGATGTTAGCACGAGCATTAGAACGGGAAGATTATACAGTTTATGGCCCCCAATTCAGTGGACACG CGACTGATGATCCACGAGATATTCTCGCACAGACGCCGGCGCAATGGTGGCAAGATACGCAACAAGCAATATCATTTATG CGGCAAAAAGGCTATACTAAAATTAGTATCTTTGGCTTATCATTAGGTGGTATTTTTGCGACGGCGGCCTTGGAGCGTGA TCCTCAGTTGCTAGGTGGTGGCACGTTTAGTTCACCACTATTTGCTGGTAATCGTAGTGACGTTGCTGAAATGTTTATCA CGCTGAGTCACCATCAACTGGCGCACAGTCAATTTTCAATTGCCGAGCGTGAACAGATCTTAATGACGTTGCCGGAACTG GTTCAGCGGCAATTGCAGGCAGTCAATACCTTTACTACGACAGAGGTTACGAGTCACCTCAGCGCTGTGACCCAACCTTT CTTCATTGGTCAGGGTGGGCAAGATGAATTAATTGATGCGACGGTGGCGCGACAATTACGTGATCAATTACCACAAGTAC CAGTTGATTTTCATTGGTATGCTGATGCTGGACACGTGATTACCGTCAACAGTGCGCATCACCAATTGGAACAAGATGTT TTAACATATTTAAAAACTATTTATAAATGA
Upstream 100 bases:
>100_bases AATCGCATTCTTTATCCTGGCGTTAGCTCTAGCATGGTACTCATCGAAGTAATTGACCGTCCTCCTGTGATTTCAGGAGG CTTTTTTTTAAGGTGGTGTA
Downstream 100 bases:
>100_bases GGTAAATAATGTCAGAAGCAAACTTACAAGAACAAATCCTGACTTTTTTGCAAGCTCATCCCGATCGCACGTATAGTGTT GAACAACTAACGGATGAATT
Product: carboxylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MMLKQPEPFFFEHGQHAVILLHAYAGSANDVRMLARALEREDYTVYGPQFSGHATDDPRDILAQTPAQWWQDTQQAISFM RQKGYTKISIFGLSLGGIFATAALERDPQLLGGGTFSSPLFAGNRSDVAEMFITLSHHQLAHSQFSIAEREQILMTLPEL VQRQLQAVNTFTTTEVTSHLSAVTQPFFIGQGGQDELIDATVARQLRDQLPQVPVDFHWYADAGHVITVNSAHHQLEQDV LTYLKTIYK
Sequences:
>Translated_249_residues MMLKQPEPFFFEHGQHAVILLHAYAGSANDVRMLARALEREDYTVYGPQFSGHATDDPRDILAQTPAQWWQDTQQAISFM RQKGYTKISIFGLSLGGIFATAALERDPQLLGGGTFSSPLFAGNRSDVAEMFITLSHHQLAHSQFSIAEREQILMTLPEL VQRQLQAVNTFTTTEVTSHLSAVTQPFFIGQGGQDELIDATVARQLRDQLPQVPVDFHWYADAGHVITVNSAHHQLEQDV LTYLKTIYK >Mature_249_residues MMLKQPEPFFFEHGQHAVILLHAYAGSANDVRMLARALEREDYTVYGPQFSGHATDDPRDILAQTPAQWWQDTQQAISFM RQKGYTKISIFGLSLGGIFATAALERDPQLLGGGTFSSPLFAGNRSDVAEMFITLSHHQLAHSQFSIAEREQILMTLPEL VQRQLQAVNTFTTTEVTSHLSAVTQPFFIGQGGQDELIDATVARQLRDQLPQVPVDFHWYADAGHVITVNSAHHQLEQDV LTYLKTIYK
Specific function: Involved in the detoxification of xenobiotics. Shows maximal activity with C6 substrates, with gradually decreasing activity from C8 to C12 substrates. No activity for higher chain length substrates acids rather than long-chain ones [H]
COG id: COG1647
COG function: function code R; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012354 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 27926; Mature: 27926
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLKQPEPFFFEHGQHAVILLHAYAGSANDVRMLARALEREDYTVYGPQFSGHATDDPRD CCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHH ILAQTPAQWWQDTQQAISFMRQKGYTKISIFGLSLGGIFATAALERDPQLLGGGTFSSPL HHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC FAGNRSDVAEMFITLSHHQLAHSQFSIAEREQILMTLPELVQRQLQAVNTFTTTEVTSHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVTQPFFIGQGGQDELIDATVARQLRDQLPQVPVDFHWYADAGHVITVNSAHHQLEQDV HHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCHHHHHHHHH LTYLKTIYK HHHHHHHCC >Mature Secondary Structure MMLKQPEPFFFEHGQHAVILLHAYAGSANDVRMLARALEREDYTVYGPQFSGHATDDPRD CCCCCCCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHH ILAQTPAQWWQDTQQAISFMRQKGYTKISIFGLSLGGIFATAALERDPQLLGGGTFSSPL HHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCC FAGNRSDVAEMFITLSHHQLAHSQFSIAEREQILMTLPELVQRQLQAVNTFTTTEVTSHL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVTQPFFIGQGGQDELIDATVARQLRDQLPQVPVDFHWYADAGHVITVNSAHHQLEQDV HHHHCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEECCHHHHHHHHH LTYLKTIYK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1369099 [H]