| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is pstF [H]
Identifier: 28377594
GI number: 28377594
Start: 670692
End: 671594
Strand: Direct
Name: pstF [H]
Synonym: lp_0733
Alternate gene names: 28377594
Gene position: 670692-671594 (Clockwise)
Preceding gene: 28377593
Following gene: 28377596
Centisome position: 20.27
GC content: 44.41
Gene sequence:
>903_bases ATGAAAAAAGCACTGACACTCGGCGCATTGGCAGTAACGATGACCATTTTACTAGCTGGTTGCGGCAGTAGCTCAGCCAC AAGTACGAAGAGTACTAGTAGCAGTAGTGGTAGTTCCAAGACTACTAAGATCGTTGCAACTGGTTCAACCGCTTTACAAC CATTAGTGGAACAGGCTGGACAGGCTTACCAGAACGAACATGCTAACGTGACCATTAACGTTCAGGGTGGTGGTTCAGGA GCAGGCTTAAGTCAGGTGGCGAAGGGTTCAGTCAATATTGGGAACTCTGATTTATTTGCACAGGAACAAAAGGGGTTAGA CGCCAAAGGGTTAGTTGACCATAAAGTGGCTGTTGTGGGGATGGCACCCGTTATTAATAAGGATGCCGGTGTCACTAATA TTTCAAAAGAACAACTTATCAAGATTTTCCAAGGCAAGATCACTAACTGGAAAGATGTTGGCGGTAAGGACGAAAAGATT ACCGTCGTTAACCGTGCTCAAGGTAGTGGGACCCGGGCGACGTTTGAAAAATGGGGATTAGACAACGCGAAGGTCGCAAC TAGCCAAGAACAAGATTCGAATGGGACCGTTCAAAAAATTGTTAGCACCACGCCTGGTGCCATCAGTTACTTAGCATTCT CATACGTTAAGAGTGACGTTCAGGCGCTTTCTATTGATAACGTCAAACCAACCGAAGCTAACGTAGCGACGAACAAGTGG AAGATTTGGGCTTATGAACACATGTATACTAAGGGGCAACCAACTGGGGAGTTGAAGAACTTCTTAACTTACATGACTTC TAAAGCCGTTCAAGGTAGTTTAGTTGAGAAATTAGGATATATTCCATTGACTTCGATGAAGGTTGATCGTGGCCAATCTG GTGCAATCACTAATTTAAAATAA
Upstream 100 bases:
>100_bases CTCCATCACTAGTCGTAGCACTCCTACCCAGTTTTGCTATGATGGTTGCCGGGTTGGTTGCTTAATTTTGATAGTCAATT GAAGAAGGGGAGTTTCAATT
Downstream 100 bases:
>100_bases ATAACAGACAAAAAGTCGAGCGATAGCTCGACTTTTTTTATGGGCCGCAATTAGTGCAACGCGGACTTTAACAATGAAAA AACAAATCATCGGCTCAAGT
Product: phosphate ABC transporter, substrate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKALTLGALAVTMTILLAGCGSSSATSTKSTSSSSGSSKTTKIVATGSTALQPLVEQAGQAYQNEHANVTINVQGGGSG AGLSQVAKGSVNIGNSDLFAQEQKGLDAKGLVDHKVAVVGMAPVINKDAGVTNISKEQLIKIFQGKITNWKDVGGKDEKI TVVNRAQGSGTRATFEKWGLDNAKVATSQEQDSNGTVQKIVSTTPGAISYLAFSYVKSDVQALSIDNVKPTEANVATNKW KIWAYEHMYTKGQPTGELKNFLTYMTSKAVQGSLVEKLGYIPLTSMKVDRGQSGAITNLK
Sequences:
>Translated_300_residues MKKALTLGALAVTMTILLAGCGSSSATSTKSTSSSSGSSKTTKIVATGSTALQPLVEQAGQAYQNEHANVTINVQGGGSG AGLSQVAKGSVNIGNSDLFAQEQKGLDAKGLVDHKVAVVGMAPVINKDAGVTNISKEQLIKIFQGKITNWKDVGGKDEKI TVVNRAQGSGTRATFEKWGLDNAKVATSQEQDSNGTVQKIVSTTPGAISYLAFSYVKSDVQALSIDNVKPTEANVATNKW KIWAYEHMYTKGQPTGELKNFLTYMTSKAVQGSLVEKLGYIPLTSMKVDRGQSGAITNLK >Mature_300_residues MKKALTLGALAVTMTILLAGCGSSSATSTKSTSSSSGSSKTTKIVATGSTALQPLVEQAGQAYQNEHANVTINVQGGGSG AGLSQVAKGSVNIGNSDLFAQEQKGLDAKGLVDHKVAVVGMAPVINKDAGVTNISKEQLIKIFQGKITNWKDVGGKDEKI TVVNRAQGSGTRATFEKWGLDNAKVATSQEQDSNGTVQKIVSTTPGAISYLAFSYVKSDVQALSIDNVKPTEANVATNKW KIWAYEHMYTKGQPTGELKNFLTYMTSKAVQGSLVEKLGYIPLTSMKVDRGQSGAITNLK
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=224, Percent_Identity=27.6785714285714, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 31480; Mature: 31480
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKALTLGALAVTMTILLAGCGSSSATSTKSTSSSSGSSKTTKIVATGSTALQPLVEQAG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHH QAYQNEHANVTINVQGGGSGAGLSQVAKGSVNIGNSDLFAQEQKGLDAKGLVDHKVAVVG HHHHCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEE MAPVINKDAGVTNISKEQLIKIFQGKITNWKDVGGKDEKITVVNRAQGSGTRATFEKWGL ECHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCEEEEEECCCCCCCHHHHHHHCC DNAKVATSQEQDSNGTVQKIVSTTPGAISYLAFSYVKSDVQALSIDNVKPTEANVATNKW CCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCE KIWAYEHMYTKGQPTGELKNFLTYMTSKAVQGSLVEKLGYIPLTSMKVDRGQSGAITNLK EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MKKALTLGALAVTMTILLAGCGSSSATSTKSTSSSSGSSKTTKIVATGSTALQPLVEQAG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHH QAYQNEHANVTINVQGGGSGAGLSQVAKGSVNIGNSDLFAQEQKGLDAKGLVDHKVAVVG HHHHCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEE MAPVINKDAGVTNISKEQLIKIFQGKITNWKDVGGKDEKITVVNRAQGSGTRATFEKWGL ECHHCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCCCCEEEEEECCCCCCCHHHHHHHCC DNAKVATSQEQDSNGTVQKIVSTTPGAISYLAFSYVKSDVQALSIDNVKPTEANVATNKW CCCEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCE KIWAYEHMYTKGQPTGELKNFLTYMTSKAVQGSLVEKLGYIPLTSMKVDRGQSGAITNLK EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]