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The map label for this gene is ydaO [H]

Identifier: 28377592

GI number: 28377592

Start: 667219

End: 669054

Strand: Direct

Name: ydaO [H]

Synonym: lp_0729

Alternate gene names: 28377592

Gene position: 667219-669054 (Clockwise)

Preceding gene: 28377591

Following gene: 28377593

Centisome position: 20.17

GC content: 47.22

Gene sequence:

>1836_bases
ATGTGGCGTTATTTAAAGCGGTTAGTTATTGGGAAACCGTTAAAAACCATGGACGAGGGTGGGCAAGCACTCACCAAGTT
CAAGGCACTGGCGCTGCTATCGTCAGATGCGCTATCATCGGTGGCTTACGGTACTGAACAGATTACGACCGTTTTGATTA
CACTTTCAGCGGCCGCGTTGATGTATCAATTGTATGTGGCGGCGCTTGTGTTAGTGCTGTTGTTTGCTATTACGATGTCG
TACCGACAAATTATTCGGGCTTATCCATCTGGCGGTGGCGCCTACGTGGTGGCAAGTACGAACTGGGGGCGGCCAGCCGG
ATTAGTTGCCGGGGGATCACTGCTGGTTGATTATATGCTGACCGTAGCGGTTTCCGTCACTTCTGGTACTGAAGCAATCA
CGTCGGCGATTCCGGCGCTAGCTAATTATCAAGTATTGATTGCCGTACTGATTGTCATCGCCATCATGGCGTTAAATTTG
CGTGGAATGCGCGAATCCGCATCATTCTTAACGTTCCCCGTTTATTTTTTCATTATTATGATTATCGGCATGATTCTATG
GGGCGTTATGAATATTGCGAGTGGTAACTTAACTTACCACGCCTCCGCAGCAGTTGGAGCACCGGTTCAAGGGATGACCC
TGGTGCTGTTCTTACGGGCCTTTTCTTCCGGCTCGTCCTCGCTGACTGGGGTGGAAGCAATCAGTAATGCGGTGCCAAAC
TTCAAACGACCGAAACGCAAGAATGCGGCGAACACGCTAGCAATCATGTCATTAGTCTTGGCCGTCTTCTTTGGTGGTAT
TACTTATTTAAGTTATTACTTAGGCGTTAAGCCACAAGTAGACAATACCGTCTTGTCACAAATTGCTACGGCGGTCTTTG
GTCACGGCTTATTCTACTACTTGTTACAATTATCGACGGCGTTAATTCTGGCCGTTGCGGCAAATACTGGTTTTTCAGCC
TTTCCAATTTTAGCTTATAACTTGGCTAAAGATAAATTTCTACCACATGCTTACATGGATCGTGGGGATCGCTTGGGCTA
CTCCAATGGGATTATCTCATTGGCGGTCGGGGCAATTGCGTTGATCTTTATCTTTCATGGGAAGACGACGCTTTTGATTC
CACTTTATGCGGTGGGGGTCTTTGTCCCATTTACTTTGTCGCAATCTGGTATGATTATTCATTGGTTCCGCGAACGGGGG
CAATGGTGGTGGATGAAGGCGGCGGTAAACTTACTTGGGGCGTTGATTTCAATTCTCCTAGTGATTTTCCTATTCTTGCT
ACATTTCGGCAATGTTTGGCCATACTTAATCGTTATGCCACTCTTACTGTACATGTTCTACCGAATCCACGTGCACTATA
ACCGGGTTGCGGCCCAGTTACGCGTGGTTGCCAAGGAAAAAGCGGCGATTCATGATTATGACGGTGCAACGGTGATCGTC
CTCGTCTCGAATGTGACGCGGGTAACTGCTCAAGCAGTCAACTACGCGCGATCCATCGGAGATTACGTCATTGCGATGCA
CGTGTCCTTTGATGAGAACCCTGAAAAGGAACACAAGACGGCGGCAGAGTTCAAAGAGACCTTCCCAGACGTCCGTTTCG
TGGACATCCATTCGTCGTATCGGTCGATTGCAACACCGACGTTACGATTCTGCGATGTGATTGCTAAACGAGCAGCGGAA
CGCAACTTCTCGACAACGGTTCTTGTCCCACAATTCGTGCCGAAGAAACCATGGCAGAATATTTTGCATAATCAAACGAG
TCTCCGATTACGAGCGGTATTAAATTCTCGTGAAAATATTATTGTTTCAACTTATAATTACCATTTAAAAGAATAG

Upstream 100 bases:

>100_bases
CCGACATTTAACTGGTAGTATTTGGCAGGGTAAAGTAGTAGAATCTACTTTGACTCAGTTTACTTTGGGATAATTATTTT
GGAATAAAGGAGTTATTATC

Downstream 100 bases:

>100_bases
TGACTTAGTATTGAAACCCGGTATAGCTACCGGGTTTTTATTTTTGTGTCATAATATGAGTAACTAAGGTTATAATTTAG
ATACTTAATCAGCCCAGTGA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MWRYLKRLVIGKPLKTMDEGGQALTKFKALALLSSDALSSVAYGTEQITTVLITLSAAALMYQLYVAALVLVLLFAITMS
YRQIIRAYPSGGGAYVVASTNWGRPAGLVAGGSLLVDYMLTVAVSVTSGTEAITSAIPALANYQVLIAVLIVIAIMALNL
RGMRESASFLTFPVYFFIIMIIGMILWGVMNIASGNLTYHASAAVGAPVQGMTLVLFLRAFSSGSSSLTGVEAISNAVPN
FKRPKRKNAANTLAIMSLVLAVFFGGITYLSYYLGVKPQVDNTVLSQIATAVFGHGLFYYLLQLSTALILAVAANTGFSA
FPILAYNLAKDKFLPHAYMDRGDRLGYSNGIISLAVGAIALIFIFHGKTTLLIPLYAVGVFVPFTLSQSGMIIHWFRERG
QWWWMKAAVNLLGALISILLVIFLFLLHFGNVWPYLIVMPLLLYMFYRIHVHYNRVAAQLRVVAKEKAAIHDYDGATVIV
LVSNVTRVTAQAVNYARSIGDYVIAMHVSFDENPEKEHKTAAEFKETFPDVRFVDIHSSYRSIATPTLRFCDVIAKRAAE
RNFSTTVLVPQFVPKKPWQNILHNQTSLRLRAVLNSRENIIVSTYNYHLKE

Sequences:

>Translated_611_residues
MWRYLKRLVIGKPLKTMDEGGQALTKFKALALLSSDALSSVAYGTEQITTVLITLSAAALMYQLYVAALVLVLLFAITMS
YRQIIRAYPSGGGAYVVASTNWGRPAGLVAGGSLLVDYMLTVAVSVTSGTEAITSAIPALANYQVLIAVLIVIAIMALNL
RGMRESASFLTFPVYFFIIMIIGMILWGVMNIASGNLTYHASAAVGAPVQGMTLVLFLRAFSSGSSSLTGVEAISNAVPN
FKRPKRKNAANTLAIMSLVLAVFFGGITYLSYYLGVKPQVDNTVLSQIATAVFGHGLFYYLLQLSTALILAVAANTGFSA
FPILAYNLAKDKFLPHAYMDRGDRLGYSNGIISLAVGAIALIFIFHGKTTLLIPLYAVGVFVPFTLSQSGMIIHWFRERG
QWWWMKAAVNLLGALISILLVIFLFLLHFGNVWPYLIVMPLLLYMFYRIHVHYNRVAAQLRVVAKEKAAIHDYDGATVIV
LVSNVTRVTAQAVNYARSIGDYVIAMHVSFDENPEKEHKTAAEFKETFPDVRFVDIHSSYRSIATPTLRFCDVIAKRAAE
RNFSTTVLVPQFVPKKPWQNILHNQTSLRLRAVLNSRENIIVSTYNYHLKE
>Mature_611_residues
MWRYLKRLVIGKPLKTMDEGGQALTKFKALALLSSDALSSVAYGTEQITTVLITLSAAALMYQLYVAALVLVLLFAITMS
YRQIIRAYPSGGGAYVVASTNWGRPAGLVAGGSLLVDYMLTVAVSVTSGTEAITSAIPALANYQVLIAVLIVIAIMALNL
RGMRESASFLTFPVYFFIIMIIGMILWGVMNIASGNLTYHASAAVGAPVQGMTLVLFLRAFSSGSSSLTGVEAISNAVPN
FKRPKRKNAANTLAIMSLVLAVFFGGITYLSYYLGVKPQVDNTVLSQIATAVFGHGLFYYLLQLSTALILAVAANTGFSA
FPILAYNLAKDKFLPHAYMDRGDRLGYSNGIISLAVGAIALIFIFHGKTTLLIPLYAVGVFVPFTLSQSGMIIHWFRERG
QWWWMKAAVNLLGALISILLVIFLFLLHFGNVWPYLIVMPLLLYMFYRIHVHYNRVAAQLRVVAKEKAAIHDYDGATVIV
LVSNVTRVTAQAVNYARSIGDYVIAMHVSFDENPEKEHKTAAEFKETFPDVRFVDIHSSYRSIATPTLRFCDVIAKRAAE
RNFSTTVLVPQFVPKKPWQNILHNQTSLRLRAVLNSRENIIVSTYNYHLKE

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87082023, Length=355, Percent_Identity=25.0704225352113, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67278; Mature: 67278

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRYLKRLVIGKPLKTMDEGGQALTKFKALALLSSDALSSVAYGTEQITTVLITLSAAAL
CHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MYQLYVAALVLVLLFAITMSYRQIIRAYPSGGGAYVVASTNWGRPAGLVAGGSLLVDYML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHHHHHHH
TVAVSVTSGTEAITSAIPALANYQVLIAVLIVIAIMALNLRGMRESASFLTFPVYFFIIM
HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IIGMILWGVMNIASGNLTYHASAAVGAPVQGMTLVLFLRAFSSGSSSLTGVEAISNAVPN
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
FKRPKRKNAANTLAIMSLVLAVFFGGITYLSYYLGVKPQVDNTVLSQIATAVFGHGLFYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LLQLSTALILAVAANTGFSAFPILAYNLAKDKFLPHAYMDRGDRLGYSNGIISLAVGAIA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
LIFIFHGKTTLLIPLYAVGVFVPFTLSQSGMIIHWFRERGQWWWMKAAVNLLGALISILL
HHHHHCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEHHCCCEEHHHHHHHHHHHHHHHHH
VIFLFLLHFGNVWPYLIVMPLLLYMFYRIHVHYNRVAAQLRVVAKEKAAIHDYDGATVIV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEE
LVSNVTRVTAQAVNYARSIGDYVIAMHVSFDENPEKEHKTAAEFKETFPDVRFVDIHSSY
EECHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHH
RSIATPTLRFCDVIAKRAAERNFSTTVLVPQFVPKKPWQNILHNQTSLRLRAVLNSRENI
HHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHCCCCCE
IVSTYNYHLKE
EEEECCCEECC
>Mature Secondary Structure
MWRYLKRLVIGKPLKTMDEGGQALTKFKALALLSSDALSSVAYGTEQITTVLITLSAAAL
CHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MYQLYVAALVLVLLFAITMSYRQIIRAYPSGGGAYVVASTNWGRPAGLVAGGSLLVDYML
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHHHHHHH
TVAVSVTSGTEAITSAIPALANYQVLIAVLIVIAIMALNLRGMRESASFLTFPVYFFIIM
HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IIGMILWGVMNIASGNLTYHASAAVGAPVQGMTLVLFLRAFSSGSSSLTGVEAISNAVPN
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
FKRPKRKNAANTLAIMSLVLAVFFGGITYLSYYLGVKPQVDNTVLSQIATAVFGHGLFYY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LLQLSTALILAVAANTGFSAFPILAYNLAKDKFLPHAYMDRGDRLGYSNGIISLAVGAIA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
LIFIFHGKTTLLIPLYAVGVFVPFTLSQSGMIIHWFRERGQWWWMKAAVNLLGALISILL
HHHHHCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEHHCCCEEHHHHHHHHHHHHHHHHH
VIFLFLLHFGNVWPYLIVMPLLLYMFYRIHVHYNRVAAQLRVVAKEKAAIHDYDGATVIV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEE
LVSNVTRVTAQAVNYARSIGDYVIAMHVSFDENPEKEHKTAAEFKETFPDVRFVDIHSSY
EECHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECHHH
RSIATPTLRFCDVIAKRAAERNFSTTVLVPQFVPKKPWQNILHNQTSLRLRAVLNSRENI
HHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHCCCCCE
IVSTYNYHLKE
EEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]