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The map label for this gene is rsmI [H]

Identifier: 28377574

GI number: 28377574

Start: 648786

End: 649682

Strand: Direct

Name: rsmI [H]

Synonym: lp_0707

Alternate gene names: 28377574

Gene position: 648786-649682 (Clockwise)

Preceding gene: 28377573

Following gene: 28377575

Centisome position: 19.61

GC content: 47.83

Gene sequence:

>897_bases
TTGGAAACACAACAAAGTTTTGCAGATCATGCGGGTATCGGGACCTTGTACTTAGTACCGACGCCAATTGGCAACTTACA
GGATATGACTTATCGGGCAGTGGCGACGCTTAAAACGGTTGACCTAATTGCCGCAGAAGATACCCGGAATACCCAAAAGT
TATTGAATCATTTTGAAATTACAACGAAACAAATTAGCTTTCATGAACATAACACCCAAGAACGGATTCCCCAGTTAATT
GAAAAATTACAGACGGGCGTTAACTTAGCACAAGTTAGCGATGCGGGGATGCCGTCAATCAGTGATCCCGGCAAAGAACT
TGTGGCAGCCTGCATTGCCGCGAATATTCCAGTCGTGCCACTACCAGGTGCCAATGCCGGCCTGACTGCGCTGATTGCTT
CTGGCCTAGTGCCACAGCCATTTTATTTCTACGGCTTTTTACCGCGTAAGAAGAATGAACAAAAAGCTGATTTGGCTAAA
TTGGCTCGGCGACATGAAACAGTGGTCTTGTACGAATCGCCATTCCGTGTTGCCAAGACCTTGACCCTCCTAGCGACCGT
CTGTGAAGGGACGCGGCCAATTGTGGCGTGCCGGGAATTGACTAAGCGTTACGAGGAATTCGCGCGTGGAACCTTGGCTG
AAATGGTGACGTGGGCGCAGGATCATCAGTTAAAGGGCGAATTTGTCCTTTTGATCGGTGGTAATCCGGATAAGGATGAA
CCAGAAACAACGGATGAATTGGCACAGTTGCCAGTCAAAGCCCAAGTCGAAGCGTTGATTGCAGCCGGAGATAAGCCCAA
CGTGGCCATTAAGACGATTGCGAAGCGACGAAATATTCCCCGGCAAAGCGTTTATAATCAATTTCATGAACTAAATACCA
ACGATGAGGAGTCTTGA

Upstream 100 bases:

>100_bases
AGTCGAAAAAGTCTGGGAGTAGTCCCAGACTTTTTGTGCTTTTCACCACGAGTCACTCATAGGAACAAGTCACGGTCGAG
AGGATTGTTAGGAGGACGTT

Downstream 100 bases:

>100_bases
TGAATGGCAACTTTAGGCGCAAATGCGAGTCTTTACAGTGAACAGCACCGGATTACGTATTATGAATGTGACCGCACTGG
TCGCGCAACCTTAACGACAT

Product: methyltransferase (putative)

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
METQQSFADHAGIGTLYLVPTPIGNLQDMTYRAVATLKTVDLIAAEDTRNTQKLLNHFEITTKQISFHEHNTQERIPQLI
EKLQTGVNLAQVSDAGMPSISDPGKELVAACIAANIPVVPLPGANAGLTALIASGLVPQPFYFYGFLPRKKNEQKADLAK
LARRHETVVLYESPFRVAKTLTLLATVCEGTRPIVACRELTKRYEEFARGTLAEMVTWAQDHQLKGEFVLLIGGNPDKDE
PETTDELAQLPVKAQVEALIAAGDKPNVAIKTIAKRRNIPRQSVYNQFHELNTNDEES

Sequences:

>Translated_298_residues
METQQSFADHAGIGTLYLVPTPIGNLQDMTYRAVATLKTVDLIAAEDTRNTQKLLNHFEITTKQISFHEHNTQERIPQLI
EKLQTGVNLAQVSDAGMPSISDPGKELVAACIAANIPVVPLPGANAGLTALIASGLVPQPFYFYGFLPRKKNEQKADLAK
LARRHETVVLYESPFRVAKTLTLLATVCEGTRPIVACRELTKRYEEFARGTLAEMVTWAQDHQLKGEFVLLIGGNPDKDE
PETTDELAQLPVKAQVEALIAAGDKPNVAIKTIAKRRNIPRQSVYNQFHELNTNDEES
>Mature_298_residues
METQQSFADHAGIGTLYLVPTPIGNLQDMTYRAVATLKTVDLIAAEDTRNTQKLLNHFEITTKQISFHEHNTQERIPQLI
EKLQTGVNLAQVSDAGMPSISDPGKELVAACIAANIPVVPLPGANAGLTALIASGLVPQPFYFYGFLPRKKNEQKADLAK
LARRHETVVLYESPFRVAKTLTLLATVCEGTRPIVACRELTKRYEEFARGTLAEMVTWAQDHQLKGEFVLLIGGNPDKDE
PETTDELAQLPVKAQVEALIAAGDKPNVAIKTIAKRRNIPRQSVYNQFHELNTNDEES

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=254, Percent_Identity=43.3070866141732, Blast_Score=194, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32881; Mature: 32881

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METQQSFADHAGIGTLYLVPTPIGNLQDMTYRAVATLKTVDLIAAEDTRNTQKLLNHFEI
CCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
TTKQISFHEHNTQERIPQLIEKLQTGVNLAQVSDAGMPSISDPGKELVAACIAANIPVVP
HHHEEECCCCCHHHHHHHHHHHHHHCCCEEHHCCCCCCCCCCCHHHHHHHHHHCCCCEEE
LPGANAGLTALIASGLVPQPFYFYGFLPRKKNEQKADLAKLARRHETVVLYESPFRVAKT
CCCCCCHHHHHHHCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHH
LTLLATVCEGTRPIVACRELTKRYEEFARGTLAEMVTWAQDHQLKGEFVLLIGGNPDKDE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PETTDELAQLPVKAQVEALIAAGDKPNVAIKTIAKRRNIPRQSVYNQFHELNTNDEES
CCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
METQQSFADHAGIGTLYLVPTPIGNLQDMTYRAVATLKTVDLIAAEDTRNTQKLLNHFEI
CCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHH
TTKQISFHEHNTQERIPQLIEKLQTGVNLAQVSDAGMPSISDPGKELVAACIAANIPVVP
HHHEEECCCCCHHHHHHHHHHHHHHCCCEEHHCCCCCCCCCCCHHHHHHHHHHCCCCEEE
LPGANAGLTALIASGLVPQPFYFYGFLPRKKNEQKADLAKLARRHETVVLYESPFRVAKT
CCCCCCHHHHHHHCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCHHHHHH
LTLLATVCEGTRPIVACRELTKRYEEFARGTLAEMVTWAQDHQLKGEFVLLIGGNPDKDE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PETTDELAQLPVKAQVEALIAAGDKPNVAIKTIAKRRNIPRQSVYNQFHELNTNDEES
CCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]