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The map label for this gene is yqaT [H]

Identifier: 28377533

GI number: 28377533

Start: 608344

End: 609630

Strand: Direct

Name: yqaT [H]

Synonym: lp_0661

Alternate gene names: 28377533

Gene position: 608344-609630 (Clockwise)

Preceding gene: 28377532

Following gene: 28377534

Centisome position: 18.39

GC content: 40.87

Gene sequence:

>1287_bases
ATGAAAATCAAAGTTAACTTAGCTAAGACGATTGGTCATGGTTATACCGATTTCTGGCGTGATCATCACTTTTACCGAGT
GATTAAAGGCAGTCGTGGATCAAAGAAGTCGGTAACCACCGCTCACAATTTAATCTACCGGTTAGTTAAGTATCATTGGT
CAAATATCTTGGTTGTAAGGCGTAATGCCAACACTAACAAGACCAGCACCTTCGTGGAATGCAAGAAGGCTATTAATGAC
TTTCACTTAGAGCGTTACTTTAAGTATAACGAGTCATTGCCAGAAATCACTTACTTGCCAACTGGTCAGAAAATCGTCTT
TCGTGGACTTGATGATCCATTAAAACTAACTTCAGTTAATGTCCCTACTGGTGAATTGTGTTGGTTGTGGGTAGAAGAAG
CCTATGAAATTGAATCATTTAGCAAGTTACAAACGGTGATTGAATCGTTACGTGGGAATGATCCACAAGTCTTTTATCAA
GTAACGCTCACGTTTAATCCTTGGAATGAGCACCACTGGCTAAAGCGTGAGTTTTTTGACCAACCACGTGATGATACATT
TGTTCGTACCACTACAGTTAGATGCAATGAGTTCGTTTCTGACGAATATAAACAGCGGCTCTATAGCTTATATCAAACTA
ATCCTAGACGTGCTAAAACAGTTGTTGATGGCGAATGGGGTGTAGCTGAAGGACTGGTATTTGAAGATAACATTGAACAA
ATTGAGTTTAACGCTATGGACAAAATACAAGAATGTGGGCAAACAGGATTTGGCCTGGACTATGGCTTCAGCAATGATCC
TAACGCTTTTGTGGCCGTTGCTGTTGATGTACGCAATAAGCAATTATGGGTTTACAACGAGATGTATACCTACCATCAAA
CGACACCACATATTGCGGAATGGTTGAAAGTCAATGGCTATGAGCGAGCTAGGATATACGCAGATAGTGCTAATTCCGAG
CGAACCGCTCAGTTAAATGATTTAGGAATTACCAATGCGGATAGCGTCGTGAAAACGCCAGTTGAGGCTGGCATTGATCA
ATTGTGGCAATATCAAATTCATGTTCACCCTAAATGTAAAAACCTGTGGCGTGAGTTGAATAGTTATGTTTTCGACAGTG
ATCGGATGGGCAATACATTAAGTAAGCCTAAAGACCAAGATAACCACGCAATTGACGCATTACGTTATGCAGTTCGCCAA
TATATGGGAGATTATGATGGCTCGTTAGGTGTTAAATGGGACGAACAATACGCGATTGGCCGCCAGATGGGAGTGAGTGA
TTATTAA

Upstream 100 bases:

>100_bases
ATTGCGGAGGCTAAGGCCAAACAGATAAGTAACACTGATGAAACTGTTCGGATTGTATTTAACGATAATTTGACACCAGA
TAGGGAGGATATCCAAGGCA

Downstream 100 bases:

>100_bases
TAGTATTTATGGAAAGCGACGCTTTGATCGTGAAGCCAATCGGGATTACACGATGCCAGTTGGCACATACACAGCAGTTG
CAGAACAGCCATTAGAGCTA

Product: prophage Lp1 protein 38

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MKIKVNLAKTIGHGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVRRNANTNKTSTFVECKKAIND
FHLERYFKYNESLPEITYLPTGQKIVFRGLDDPLKLTSVNVPTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQ
VTLTFNPWNEHHWLKREFFDQPRDDTFVRTTTVRCNEFVSDEYKQRLYSLYQTNPRRAKTVVDGEWGVAEGLVFEDNIEQ
IEFNAMDKIQECGQTGFGLDYGFSNDPNAFVAVAVDVRNKQLWVYNEMYTYHQTTPHIAEWLKVNGYERARIYADSANSE
RTAQLNDLGITNADSVVKTPVEAGIDQLWQYQIHVHPKCKNLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQ
YMGDYDGSLGVKWDEQYAIGRQMGVSDY

Sequences:

>Translated_428_residues
MKIKVNLAKTIGHGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVRRNANTNKTSTFVECKKAIND
FHLERYFKYNESLPEITYLPTGQKIVFRGLDDPLKLTSVNVPTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQ
VTLTFNPWNEHHWLKREFFDQPRDDTFVRTTTVRCNEFVSDEYKQRLYSLYQTNPRRAKTVVDGEWGVAEGLVFEDNIEQ
IEFNAMDKIQECGQTGFGLDYGFSNDPNAFVAVAVDVRNKQLWVYNEMYTYHQTTPHIAEWLKVNGYERARIYADSANSE
RTAQLNDLGITNADSVVKTPVEAGIDQLWQYQIHVHPKCKNLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQ
YMGDYDGSLGVKWDEQYAIGRQMGVSDY
>Mature_428_residues
MKIKVNLAKTIGHGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVRRNANTNKTSTFVECKKAIND
FHLERYFKYNESLPEITYLPTGQKIVFRGLDDPLKLTSVNVPTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQ
VTLTFNPWNEHHWLKREFFDQPRDDTFVRTTTVRCNEFVSDEYKQRLYSLYQTNPRRAKTVVDGEWGVAEGLVFEDNIEQ
IEFNAMDKIQECGQTGFGLDYGFSNDPNAFVAVAVDVRNKQLWVYNEMYTYHQTTPHIAEWLKVNGYERARIYADSANSE
RTAQLNDLGITNADSVVKTPVEAGIDQLWQYQIHVHPKCKNLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQ
YMGDYDGSLGVKWDEQYAIGRQMGVSDY

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 50016; Mature: 50016

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKVNLAKTIGHGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVR
CEEEEEEHHHHCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
RNANTNKTSTFVECKKAINDFHLERYFKYNESLPEITYLPTGQKIVFRGLDDPLKLTSVN
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCEEEEEC
VPTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQVTLTFNPWNEHHWLKREFFD
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHCC
QPRDDTFVRTTTVRCNEFVSDEYKQRLYSLYQTNPRRAKTVVDGEWGVAEGLVFEDNIEQ
CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCCCCCCEEEECCCCC
IEFNAMDKIQECGQTGFGLDYGFSNDPNAFVAVAVDVRNKQLWVYNEMYTYHQTTPHIAE
EEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCHHHHH
WLKVNGYERARIYADSANSERTAQLNDLGITNADSVVKTPVEAGIDQLWQYQIHVHPKCK
HHHCCCCEEEEEEECCCCCCCCEEHHCCCCCCCCHHHHCHHHHHHHHHEEEEEEECCHHH
NLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQYMGDYDGSLGVKWDEQYAIG
HHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHH
RQMGVSDY
HCCCCCCC
>Mature Secondary Structure
MKIKVNLAKTIGHGYTDFWRDHHFYRVIKGSRGSKKSVTTAHNLIYRLVKYHWSNILVVR
CEEEEEEHHHHCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
RNANTNKTSTFVECKKAINDFHLERYFKYNESLPEITYLPTGQKIVFRGLDDPLKLTSVN
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCEEEEEC
VPTGELCWLWVEEAYEIESFSKLQTVIESLRGNDPQVFYQVTLTFNPWNEHHWLKREFFD
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHCC
QPRDDTFVRTTTVRCNEFVSDEYKQRLYSLYQTNPRRAKTVVDGEWGVAEGLVFEDNIEQ
CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCCCCCCEEEECCCCC
IEFNAMDKIQECGQTGFGLDYGFSNDPNAFVAVAVDVRNKQLWVYNEMYTYHQTTPHIAE
EEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEEECCCCHHHHH
WLKVNGYERARIYADSANSERTAQLNDLGITNADSVVKTPVEAGIDQLWQYQIHVHPKCK
HHHCCCCEEEEEEECCCCCCCCEEHHCCCCCCCCHHHHCHHHHHHHHHEEEEEEECCHHH
NLWRELNSYVFDSDRMGNTLSKPKDQDNHAIDALRYAVRQYMGDYDGSLGVKWDEQYAIG
HHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHH
RQMGVSDY
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]