Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is 28377528
Identifier: 28377528
GI number: 28377528
Start: 605444
End: 605611
Strand: Direct
Name: 28377528
Synonym: lp_0655
Alternate gene names: NA
Gene position: 605444-605611 (Clockwise)
Preceding gene: 28377527
Following gene: 28377529
Centisome position: 18.3
GC content: 47.02
Gene sequence:
>168_bases ATGAGTGACACCGAATACGCAAAAGCAATCCGAATGAAAGCCACAGTTGCCAACCTGGAAATGAACGCGGCACTGACAAC TGAGCAACAGGCACAAATTGGCCAGGACTTCATTGCTGACATTATGGAGTTGAGTGATCACGAGAGTAAACAAAAAGCCG CCTACTAG
Upstream 100 bases:
>100_bases AGCTATTTGCCGCATCTCAGGATGTGGAACATTGGATCGAGCATAATTCGGACGTCTTTGCCCGTGCGTGGCTGGACGGA TATCAAGTGGAGGAAGATAA
Downstream 100 bases:
>100_bases GGCGACTAGTCACAGGACCACTCGAATGACCGTTGTTAGTATAACATATAAAAAGCGCTGCCATCGCTGACCGCGCTACG ATTGATACCTAGCACATTAA
Product: prophage Lp1 protein 32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MSDTEYAKAIRMKATVANLEMNAALTTEQQAQIGQDFIADIMELSDHESKQKAAY
Sequences:
>Translated_55_residues MSDTEYAKAIRMKATVANLEMNAALTTEQQAQIGQDFIADIMELSDHESKQKAAY >Mature_54_residues SDTEYAKAIRMKATVANLEMNAALTTEQQAQIGQDFIADIMELSDHESKQKAAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6122; Mature: 5991
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTEYAKAIRMKATVANLEMNAALTTEQQAQIGQDFIADIMELSDHESKQKAAY CCCHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SDTEYAKAIRMKATVANLEMNAALTTEQQAQIGQDFIADIMELSDHESKQKAAY CCHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA