Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is recT [C]
Identifier: 28377514
GI number: 28377514
Start: 599200
End: 600087
Strand: Direct
Name: recT [C]
Synonym: lp_0641
Alternate gene names: 28377514
Gene position: 599200-600087 (Clockwise)
Preceding gene: 28377513
Following gene: 28377515
Centisome position: 18.11
GC content: 42.34
Gene sequence:
>888_bases ATGAGTAATGAGCTAGTTACGATGGTTAATAACAATATTGAGGATATGAAGAATAATGAAGGCTTGTCATTACCACCTGA TTATTCAGTAGGGAATGCATTAAACAGTGCTTACTTGATTTTGAGTGATACGTCTAAGGGCCAACCATTACTTGATAAGT GTGACCAAGGATCAGTTATCAAGGCGTTAATGAACATGGCAATTCAAGGATTGAGCCCAGCTAAAAACCAATGCTATTTC ATTCCTTATGGTAACCAGTTAGTCATGCAGCGTTCCTATTTTGGCTCAATTAGCGTTGTAAAGCGTCTTTCAAACGTTAA GGATATTCAGGCACAGGTTGTCCACAAAGACGACACGTTCAAGATTGGTGGTAAAGATGGAGTGTTGGTGGTTAAAGAGT TCGAGCCAAGCTTTGAGAACCTAGATAAGCCAATTATCGGGGCCTTTGCATGGATCGAAGACATCAACGGGAACCGGACA TACACGGTTATGACAAAAAAGGACATCGACATCAGTTGGAGCCACGCTAAGACGAAGAAGGTTCAAAACGAGTTCCCAGA AGAGATGGCTAAACGGACTGTAATTAATCGAGCTGCTAAGTTCTATATTAATTCAAGCTCAGACAACGATTTATTTGTAA AAGCAGTTAACGAAACCACTAGCAACGAATATGAGAATGACGAAAGAAAAGACGTAACACCGGCTAAGCGGTCACTAGTA GCTGACGTAGCAGAGAATAAAGCCGAGAAGGTAGAATCTGCCGAACCAGCTAAAGAACCCGTTAGAACGGCTGTAAAGGA GGCATCAAGCAATGATCAAGAACCTGTCAAAGGCGAAGTCGACCAGCAAAACCTCTTCGACAACCTCGGAGACTTTGACG CCAGCTAA
Upstream 100 bases:
>100_bases TTGGTCAGTCCCGTCTATGGGACGAGCTACTGGTACACATCGACACGGACACGATGATGACACGTCTGGGCTATCACTGG GTATCAGAGGGGGAAGAAGC
Downstream 100 bases:
>100_bases CTATTACGATCGCTGGACAGATCAATCATTTATGTCAGCAACATGGTTCAAGAAGTTTTTAGCCTGTGAAGCAGAAGCGT TAGCCGAGCTTACTGGTAAA
Product: prophage Lp1 protein 18
Products: NA
Alternate protein names: RecT Family Protein; Prophage Lp1 Protein; Protein RecT; Rect Protein; Recombinase Phage RecT Family; Phage-Related DNA Recombination Protein; Phage-Like Protein; Recombination Protein RecT
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVIKALMNMAIQGLSPAKNQCYF IPYGNQLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTFKIGGKDGVLVVKEFEPSFENLDKPIIGAFAWIEDINGNRT YTVMTKKDIDISWSHAKTKKVQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVKAVNETTSNEYENDERKDVTPAKRSLV ADVAENKAEKVESAEPAKEPVRTAVKEASSNDQEPVKGEVDQQNLFDNLGDFDAS
Sequences:
>Translated_295_residues MSNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVIKALMNMAIQGLSPAKNQCYF IPYGNQLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTFKIGGKDGVLVVKEFEPSFENLDKPIIGAFAWIEDINGNRT YTVMTKKDIDISWSHAKTKKVQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVKAVNETTSNEYENDERKDVTPAKRSLV ADVAENKAEKVESAEPAKEPVRTAVKEASSNDQEPVKGEVDQQNLFDNLGDFDAS >Mature_294_residues SNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVIKALMNMAIQGLSPAKNQCYFI PYGNQLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTFKIGGKDGVLVVKEFEPSFENLDKPIIGAFAWIEDINGNRTY TVMTKKDIDISWSHAKTKKVQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVKAVNETTSNEYENDERKDVTPAKRSLVA DVAENKAEKVESAEPAKEPVRTAVKEASSNDQEPVKGEVDQQNLFDNLGDFDAS
Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]
COG id: COG3723
COG function: function code L; Recombinational DNA repair protein (RecE pathway)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787611, Length=171, Percent_Identity=30.9941520467836, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32803; Mature: 32672
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVI CCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHH KALMNMAIQGLSPAKNQCYFIPYGNQLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTF HHHHHHHHCCCCCCCCEEEEEECCCEEEEEHHHCCHHHHHHHHHHHHHHHHHEEECCCCE KIGGKDGVLVVKEFEPSFENLDKPIIGAFAWIEDINGNRTYTVMTKKDIDISWSHAKTKK EECCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECCHHHHHH VQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVKAVNETTSNEYENDERKDVTPAKRSLV HHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH ADVAENKAEKVESAEPAKEPVRTAVKEASSNDQEPVKGEVDQQNLFDNLGDFDAS HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure SNELVTMVNNNIEDMKNNEGLSLPPDYSVGNALNSAYLILSDTSKGQPLLDKCDQGSVI CCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHH KALMNMAIQGLSPAKNQCYFIPYGNQLVMQRSYFGSISVVKRLSNVKDIQAQVVHKDDTF HHHHHHHHCCCCCCCCEEEEEECCCEEEEEHHHCCHHHHHHHHHHHHHHHHHEEECCCCE KIGGKDGVLVVKEFEPSFENLDKPIIGAFAWIEDINGNRTYTVMTKKDIDISWSHAKTKK EECCCCCEEEEEECCCCHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECCHHHHHH VQNEFPEEMAKRTVINRAAKFYINSSSDNDLFVKAVNETTSNEYENDERKDVTPAKRSLV HHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH ADVAENKAEKVESAEPAKEPVRTAVKEASSNDQEPVKGEVDQQNLFDNLGDFDAS HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA