| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377494
Identifier: 28377494
GI number: 28377494
Start: 586639
End: 587520
Strand: Direct
Name: 28377494
Synonym: lp_0618
Alternate gene names: NA
Gene position: 586639-587520 (Clockwise)
Preceding gene: 28377493
Following gene: 28377495
Centisome position: 17.73
GC content: 48.75
Gene sequence:
>882_bases TTGGCAGAAGTAATTTTAGTCATCATCGGCGCCTTAGTGCTCGGTATTTTGGGGCGTATCACCTTTAAATTTTGGCAATA CGGGCGACCGCAGCATTTGCGGCAGTCGGTGTCGGCTAATTCAGCAGATGATAGCGCCGTGACGCTATTTATTCCAGGGT ATGCGGGCAACCGGTTCTCTTTTGGTGGCATGCTCCAACGTTTTACGGCCGGGGGCATCGCCAATAAGTCATTAGTCGTA ATGATTGATCGACATAATCATCCCCATGTGACTGGTGAGCTAGACGCTTACCGCCCAATGGTACAGTTGATTTTTGCCAC GCCACGCGTTGCTGTACGGCAACAGGCGGCGGGCGTCTTGGCAGTTGTGCAGTATTTGATTGCGCATGAGCACGTTCAGA CGATCAATTTAGTCGCTCATTCGATGGGTGGTGTGGTGCTCTTTCAATACTTGACGACAGCTGCCAAACTGGTCAATTTA CCGGAAGTCCGCAAGGTTGTCACAATTGGTGCGCCGTTTAATGATAGTGAGGTCGGGCAGAATACGTATCCGATTGAAAA CCACCCGTTGACGGCGACCGGACCAACTAAGACCACGCCCGTTTATAATTATTTTTTGCGAACGCTCCAACGATTGCCAA ACACGATTTCGTATTTGAATATTGCGGGTAACATTGGCGATGCGGCGCAAAGTGATGGTGCTGTCGCTCTGAATAGTGCG TTGTCATTGCGCTTTTTACTGCGACCGACGCGTGACCAGTATCAAGAATTTGTGGTACATGGTAAGAATGCCCGCCATTC ACGATTACATGAAAACTATGAAGTTGATCGCCAAATCGTCCAGTTTTTTATATCCAGAAGCCACAAAAAAGGTTGCTGGT GA
Upstream 100 bases:
>100_bases GGTTAATATCAATATGTTCGGTCGGGAAACAAGTACTGAATTGGACTTCGATCAAGTTGACCAGATTCGGTAATTAATTT AAGTAAGCTGGTGGACCATC
Downstream 100 bases:
>100_bases AAAATAGATATGCTACAATGATGTTTGTGCGTCACGTATGCACGTTTACGTGGGAGGAGCAAAAACTCAGCTCCATTTAC CACATCACGGACTAAGGAGG
Product: cell surface hydrolase, membrane-bound (putative)
Products: NA
Alternate protein names: Cell Surface Hydrolase; Cell Surface Hydrolase Membrane-Bound; Lipoprotein; Lipase/Esterase; Alpha/Beta Hydrolase; Cell Surface Hydrolas; Extracellular Lipase/Esterase; Secreted Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MAEVILVIIGALVLGILGRITFKFWQYGRPQHLRQSVSANSADDSAVTLFIPGYAGNRFSFGGMLQRFTAGGIANKSLVV MIDRHNHPHVTGELDAYRPMVQLIFATPRVAVRQQAAGVLAVVQYLIAHEHVQTINLVAHSMGGVVLFQYLTTAAKLVNL PEVRKVVTIGAPFNDSEVGQNTYPIENHPLTATGPTKTTPVYNYFLRTLQRLPNTISYLNIAGNIGDAAQSDGAVALNSA LSLRFLLRPTRDQYQEFVVHGKNARHSRLHENYEVDRQIVQFFISRSHKKGCW
Sequences:
>Translated_293_residues MAEVILVIIGALVLGILGRITFKFWQYGRPQHLRQSVSANSADDSAVTLFIPGYAGNRFSFGGMLQRFTAGGIANKSLVV MIDRHNHPHVTGELDAYRPMVQLIFATPRVAVRQQAAGVLAVVQYLIAHEHVQTINLVAHSMGGVVLFQYLTTAAKLVNL PEVRKVVTIGAPFNDSEVGQNTYPIENHPLTATGPTKTTPVYNYFLRTLQRLPNTISYLNIAGNIGDAAQSDGAVALNSA LSLRFLLRPTRDQYQEFVVHGKNARHSRLHENYEVDRQIVQFFISRSHKKGCW >Mature_292_residues AEVILVIIGALVLGILGRITFKFWQYGRPQHLRQSVSANSADDSAVTLFIPGYAGNRFSFGGMLQRFTAGGIANKSLVVM IDRHNHPHVTGELDAYRPMVQLIFATPRVAVRQQAAGVLAVVQYLIAHEHVQTINLVAHSMGGVVLFQYLTTAAKLVNLP EVRKVVTIGAPFNDSEVGQNTYPIENHPLTATGPTKTTPVYNYFLRTLQRLPNTISYLNIAGNIGDAAQSDGAVALNSAL SLRFLLRPTRDQYQEFVVHGKNARHSRLHENYEVDRQIVQFFISRSHKKGCW
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32489; Mature: 32358
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVILVIIGALVLGILGRITFKFWQYGRPQHLRQSVSANSADDSAVTLFIPGYAGNRFS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC FGGMLQRFTAGGIANKSLVVMIDRHNHPHVTGELDAYRPMVQLIFATPRVAVRQQAAGVL HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH AVVQYLIAHEHVQTINLVAHSMGGVVLFQYLTTAAKLVNLPEVRKVVTIGAPFNDSEVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCCC NTYPIENHPLTATGPTKTTPVYNYFLRTLQRLPNTISYLNIAGNIGDAAQSDGAVALNSA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCEEEHHH LSLRFLLRPTRDQYQEFVVHGKNARHSRLHENYEVDRQIVQFFISRSHKKGCW HHHHHEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AEVILVIIGALVLGILGRITFKFWQYGRPQHLRQSVSANSADDSAVTLFIPGYAGNRFS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC FGGMLQRFTAGGIANKSLVVMIDRHNHPHVTGELDAYRPMVQLIFATPRVAVRQQAAGVL HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH AVVQYLIAHEHVQTINLVAHSMGGVVLFQYLTTAAKLVNLPEVRKVVTIGAPFNDSEVGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCCCC NTYPIENHPLTATGPTKTTPVYNYFLRTLQRLPNTISYLNIAGNIGDAAQSDGAVALNSA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCCCCEEEHHH LSLRFLLRPTRDQYQEFVVHGKNARHSRLHENYEVDRQIVQFFISRSHKKGCW HHHHHEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA