Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 28377493

GI number: 28377493

Start: 586063

End: 586611

Strand: Direct

Name: nusG [H]

Synonym: lp_0617

Alternate gene names: 28377493

Gene position: 586063-586611 (Clockwise)

Preceding gene: 28377492

Following gene: 28377494

Centisome position: 17.72

GC content: 42.81

Gene sequence:

>549_bases
ATGGTCGAGTCTGTTGAGAAAAGATGGTATGTCTTACATACCTACGCTGGTTATGAAAATAAGGTTAGTTCTAACTTGGA
ATCCCGTATTCAATCTATGGGAATGGAAGACAATATTTTCCGGGTCGTTGTTCCCGAAGAAGAAGCTCATGAAGTCAAGA
ATGGGAAAGACAAAGTTGAAATGAAGAAGATCTTCCCCGGGTACGTTTTGGTTGAAATGGTCATGACGGACCAAGCTTGG
TATATTGTTCGGAATACGCCAGGTGTTACTGGGTTCTTAGGATCACATGGGCAAGGTAGTAAACCAACGCCATTGTTGCC
TGAAGAAGCGGAACAAATCTTGCATCAACTAGGCATGAGTGCTCGGCATACCGAATTGGACGTTGAAGTTGGCGAACAAG
TTACCATCATCGATGGCGCTTTCTCTGGCCTTTCTGGTGAAATTACTGAAATTGACAACGAAAAGATGAAGCTCAAGGTT
AATATCAATATGTTCGGTCGGGAAACAAGTACTGAATTGGACTTCGATCAAGTTGACCAGATTCGGTAA

Upstream 100 bases:

>100_bases
TTTTTGAACAAATTTTTGTTATAATAATGGCATTGAAAGAAAACTTCGTGCAAACGAGGTTTTTTTATTTTGCCAAAAGA
CATTTTAAAGGAGAATAATA

Downstream 100 bases:

>100_bases
TTAATTTAAGTAAGCTGGTGGACCATCTTGGCAGAAGTAATTTTAGTCATCATCGGCGCCTTAGTGCTCGGTATTTTGGG
GCGTATCACCTTTAAATTTT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVESVEKRWYVLHTYAGYENKVSSNLESRIQSMGMEDNIFRVVVPEEEAHEVKNGKDKVEMKKIFPGYVLVEMVMTDQAW
YIVRNTPGVTGFLGSHGQGSKPTPLLPEEAEQILHQLGMSARHTELDVEVGEQVTIIDGAFSGLSGEITEIDNEKMKLKV
NINMFGRETSTELDFDQVDQIR

Sequences:

>Translated_182_residues
MVESVEKRWYVLHTYAGYENKVSSNLESRIQSMGMEDNIFRVVVPEEEAHEVKNGKDKVEMKKIFPGYVLVEMVMTDQAW
YIVRNTPGVTGFLGSHGQGSKPTPLLPEEAEQILHQLGMSARHTELDVEVGEQVTIIDGAFSGLSGEITEIDNEKMKLKV
NINMFGRETSTELDFDQVDQIR
>Mature_182_residues
MVESVEKRWYVLHTYAGYENKVSSNLESRIQSMGMEDNIFRVVVPEEEAHEVKNGKDKVEMKKIFPGYVLVEMVMTDQAW
YIVRNTPGVTGFLGSHGQGSKPTPLLPEEAEQILHQLGMSARHTELDVEVGEQVTIIDGAFSGLSGEITEIDNEKMKLKV
NINMFGRETSTELDFDQVDQIR

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=183, Percent_Identity=42.0765027322404, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20594; Mature: 20594

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVESVEKRWYVLHTYAGYENKVSSNLESRIQSMGMEDNIFRVVVPEEEAHEVKNGKDKVE
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCHHH
MKKIFPGYVLVEMVMTDQAWYIVRNTPGVTGFLGSHGQGSKPTPLLPEEAEQILHQLGMS
HHHHCCCHHEEHEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
ARHTELDVEVGEQVTIIDGAFSGLSGEITEIDNEKMKLKVNINMFGRETSTELDFDQVDQ
CCCEEEEEECCCEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCHHHHCC
IR
CC
>Mature Secondary Structure
MVESVEKRWYVLHTYAGYENKVSSNLESRIQSMGMEDNIFRVVVPEEEAHEVKNGKDKVE
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCCCCHHH
MKKIFPGYVLVEMVMTDQAWYIVRNTPGVTGFLGSHGQGSKPTPLLPEEAEQILHQLGMS
HHHHCCCHHEEHEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC
ARHTELDVEVGEQVTIIDGAFSGLSGEITEIDNEKMKLKVNINMFGRETSTELDFDQVDQ
CCCEEEEEECCCEEEEEECCCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCHHHHCC
IR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7968510; 9384377 [H]