| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pts9AB [H]
Identifier: 28377456
GI number: 28377456
Start: 533143
End: 534117
Strand: Direct
Name: pts9AB [H]
Synonym: lp_0575
Alternate gene names: 28377456
Gene position: 533143-534117 (Clockwise)
Preceding gene: 28377455
Following gene: 28377457
Centisome position: 16.12
GC content: 43.08
Gene sequence:
>975_bases ATGGTAAGCATTATCATTGCTAGTCACGGCGAATTCGCTAAAGGCATCTATCAATCTGGATCAATGATTTTCGGCGAACA AGAAAACGTTCAAGCCGTTACGTTGATGCCTAGCGAAGGCCCTGACGACATCAAGGCTAAGTTGGAAAAAGCCATTGCTT CATTCGACGATCAAGAGCAAGTCTTATTCTTAGTCGACCTTTGGGGCGGTACACCATTCAATCAAGTTAACGGCTTGTTT GAAGCACACAAGGACAAATGGGCAATCGTTGCCGGTTTGAACTTGCCAATGTTAATTGAAGCGTATGCTTCACGACTTTC AATGGATTCGGCACACGAAATTGCCACGCATATCATTGAAACTGCTAAGGATGGCGTAAAGGTTCGTCCTGAAGCATTAG CACCTAAGGAAGAAAAGGCTGCTGCCGCTGCAACGACCAACAATAACGCTGGCCGGCCAGGGAAGTTGGAATATGGGTTA GCACGGATTGACTCGCGACTCTTGCATGGACAAGTTGCTACTGCTTGGAGTAAGACAGTTAACCCAACTCGGATCATTGT TGTTTCCGATAGTGTTGCTAAGGATGATTTACGTTCAAACATGATTAAGCAAGCTGCTCCAGCAGGCGTACATGCTCATG TTATTCCAATTGATCAAATGATTAAGATTGCTAAAGACGACAAGCACTTTGGTGGTCAAAAGGCGTTGGTCTTATTCGAA ACGCCACAAGATGCATTACGTGCAATCGAGGGTGGCGTGCCAATTAAGACCTTGAACATTGGTTCAATGGCGCACTCAGT TGGTAAAGTTCAACCAAACAAAGTTTTGGCTTTTGATCAAGATGATATTGATACTTACAAGAAGTTGGAACAAGACGGCG TCGAATTTGATGTTCGTAAAGTTCCTTCAGATAGTAAGGATAATATGGATAATATTCTTAAAAAGGCTCAAAACATGTTA AATGAACAAAAGTAG
Upstream 100 bases:
>100_bases AGATTGCGCTTACAGTATCAAAAACATAAATAGTTACAGGCAATTTAGATATTATTTATTCGTTTTATATGACTGTAACG AAAAAATAGGAGGTACAAAG
Downstream 100 bases:
>100_bases TATAGATAACTATCAGAAGAAAATGGAGGATTAAATCATGAATTTGAATGCAATTCAAATGATTTTAGTCGTACTCGTTG CATTTTTAGCTGGTATGGAA
Product: mannose PTS, EIIAB
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MVSIIIASHGEFAKGIYQSGSMIFGEQENVQAVTLMPSEGPDDIKAKLEKAIASFDDQEQVLFLVDLWGGTPFNQVNGLF EAHKDKWAIVAGLNLPMLIEAYASRLSMDSAHEIATHIIETAKDGVKVRPEALAPKEEKAAAAATTNNNAGRPGKLEYGL ARIDSRLLHGQVATAWSKTVNPTRIIVVSDSVAKDDLRSNMIKQAAPAGVHAHVIPIDQMIKIAKDDKHFGGQKALVLFE TPQDALRAIEGGVPIKTLNIGSMAHSVGKVQPNKVLAFDQDDIDTYKKLEQDGVEFDVRKVPSDSKDNMDNILKKAQNML NEQK
Sequences:
>Translated_324_residues MVSIIIASHGEFAKGIYQSGSMIFGEQENVQAVTLMPSEGPDDIKAKLEKAIASFDDQEQVLFLVDLWGGTPFNQVNGLF EAHKDKWAIVAGLNLPMLIEAYASRLSMDSAHEIATHIIETAKDGVKVRPEALAPKEEKAAAAATTNNNAGRPGKLEYGL ARIDSRLLHGQVATAWSKTVNPTRIIVVSDSVAKDDLRSNMIKQAAPAGVHAHVIPIDQMIKIAKDDKHFGGQKALVLFE TPQDALRAIEGGVPIKTLNIGSMAHSVGKVQPNKVLAFDQDDIDTYKKLEQDGVEFDVRKVPSDSKDNMDNILKKAQNML NEQK >Mature_324_residues MVSIIIASHGEFAKGIYQSGSMIFGEQENVQAVTLMPSEGPDDIKAKLEKAIASFDDQEQVLFLVDLWGGTPFNQVNGLF EAHKDKWAIVAGLNLPMLIEAYASRLSMDSAHEIATHIIETAKDGVKVRPEALAPKEEKAAAAATTNNNAGRPGKLEYGL ARIDSRLLHGQVATAWSKTVNPTRIIVVSDSVAKDDLRSNMIKQAAPAGVHAHVIPIDQMIKIAKDDKHFGGQKALVLFE TPQDALRAIEGGVPIKTLNIGSMAHSVGKVQPNKVLAFDQDDIDTYKKLEQDGVEFDVRKVPSDSKDNMDNILKKAQNML NEQK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=320, Percent_Identity=39.6875, Blast_Score=234, Evalue=5e-63, Organism=Escherichia coli, GI87082217, Length=156, Percent_Identity=32.0512820512821, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789527, Length=152, Percent_Identity=33.5526315789474, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR004720 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 35284; Mature: 35284
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS51096 PTS_EIIA_TYPE_4 ; PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIIIASHGEFAKGIYQSGSMIFGEQENVQAVTLMPSEGPDDIKAKLEKAIASFDDQEQ CEEEEEECCCHHHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC VLFLVDLWGGTPFNQVNGLFEAHKDKWAIVAGLNLPMLIEAYASRLSMDSAHEIATHIIE EEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHH TAKDGVKVRPEALAPKEEKAAAAATTNNNAGRPGKLEYGLARIDSRLLHGQVATAWSKTV HHCCCCEECHHHCCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC NPTRIIVVSDSVAKDDLRSNMIKQAAPAGVHAHVIPIDQMIKIAKDDKHFGGQKALVLFE CCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEEEE TPQDALRAIEGGVPIKTLNIGSMAHSVGKVQPNKVLAFDQDDIDTYKKLEQDGVEFDVRK CCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEE VPSDSKDNMDNILKKAQNMLNEQK CCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVSIIIASHGEFAKGIYQSGSMIFGEQENVQAVTLMPSEGPDDIKAKLEKAIASFDDQEQ CEEEEEECCCHHHHHHHHCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC VLFLVDLWGGTPFNQVNGLFEAHKDKWAIVAGLNLPMLIEAYASRLSMDSAHEIATHIIE EEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHH TAKDGVKVRPEALAPKEEKAAAAATTNNNAGRPGKLEYGLARIDSRLLHGQVATAWSKTV HHCCCCEECHHHCCCCHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC NPTRIIVVSDSVAKDDLRSNMIKQAAPAGVHAHVIPIDQMIKIAKDDKHFGGQKALVLFE CCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEEEE TPQDALRAIEGGVPIKTLNIGSMAHSVGKVQPNKVLAFDQDDIDTYKKLEQDGVEFDVRK CCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEE VPSDSKDNMDNILKKAQNMLNEQK CCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA