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The map label for this gene is tex [H]

Identifier: 28377451

GI number: 28377451

Start: 526773

End: 528944

Strand: Direct

Name: tex [H]

Synonym: lp_0569

Alternate gene names: 28377451

Gene position: 526773-528944 (Clockwise)

Preceding gene: 28377450

Following gene: 28377452

Centisome position: 15.92

GC content: 48.16

Gene sequence:

>2172_bases
ATGGATAATCAGATTTTAACGTTAGTTAATCAAACGCTGACGAAGTTTAAACCGCAACAGATCAAAGCGGTTCTCGGACT
CATGGACGAAGGCAACACCGTTCCGTTTATCGCACGGTATCGAAAGGAACGTACCGGTAACTTAGATGAAGTTGAAATTC
GCGAAATTAAAGATAACTATGATCGGCTTGCGAGTCTAGAGAGTCGTAAGGCAGATGTGATGAAGTTGATCGCTGAACAA
GATCACTTGACGCCGGCTTTAAAGCAAGCCATTGAAAAAGCTGACAAGTTGCAAGATGTCGAAGATTTGTACTTACCGTA
CAAACAGAAGCGACGTACGAAGGCAACGATTGCGAAAGATGCTGGACTGGAGCCGTTAGCAGCTTGGTTATTACGTTTTC
CGGCAAGTGGTATTCAGGAACACGCGGCGCAGTTTGTGAACGAAGCGCAGGACATCACAGACGCGAATACCGCGTTAGCT
GGAGCTCACGAAATCTTGGCTGAGGCCTTTGGTGATAATGCCGGTTTACGAAACTGGGTCCGGAATTATACGCGTGACCG
GGGCTTACTAGTCGCAAAAGTGAAACCCAAGGGTAAAGCAGCCGATGAACAAGGTGTTTACCAACAGTATTATGATTTTA
ATAGTCCCATCAAGCAGATGGTACCGTACCGGGTACTGGCTATCAACCGTGGGGAAGCCGAAAAAGTATTGAAAGTCAGC
ATTGATGTTGATCGTGCTGGAATTGACCGGTATTGTCATTTTCGTTTTATTGGTCAGCACCACGGCCCAGCGATTGAACT
AGTAGAAGCTGCTTATCAGGATGCCTACAAACGCTTTATTGGCCCGGCCATCGAACGTGAACTTCGCAACGAATTGAGTG
CGGCTGCCAATGAACAGGCCATCAAAGTCTTTGGCGATAATTTGTACCACTTATTAATGCAGGCACCATTAAAAGGTCGC
GTGGTATTAGGGTTCGACCCCGCTTACCGGACGGGGTGTAAATTAGCCGTGATGGATGCGAATGGTAAGTTCTTAGATAA
GCTTGTGATTTATCCACACAAACCAGCCCCAACTGCCAAACGGGAAGCTGCTGCGGGTGAGTTTAAAGCCTTTTTAGAGA
AGTATCATGTTGAAATGATTGCGATTGGTAACGGGACGGCTTCCCGCGAATCCGAGGAGTTTGTGGCACAGGTATTGAAG
ACTATGACCCGACCGGTTTATTATGTCATCGTTAACGAAGCCGGGGCTTCCGTGTACTCTGCTAGTGCTAAGGCGCGTGC
TGAATTTCCTGAGCTACACGTTGAACAACGTAGTGCGATCAGTATCGGCCGGCGACTACAAGACCCACTGGCAGAATTGA
TCAAAATCGATCCGAAGTCAGTGGGAGTGGGGCAATACCAACACGATGTGCCCCAGAAGGAATTGACAACGCAGCTAGAT
ACGGTGATTGAGACCGCGGTTAACCAAGTTGGGGTCAATTTGAATACCGCTAGTTCGGAGCTATTGACGCATATTTCGGG
GCTATCCAGCACGATTGCCCAAAATGTGATTACTTATCGGGATGAAAATGGCGAATTCACGAGCCGACCACAATTGAAAA
AAGTGCCGCGGTTGGGACCGAAAGCTTATGAACAAGCGGTCGGCTTCCTGCGAATCATTGACGGCAAGAATGTTTTTGAT
AACACGGATATTCATCCAGAAAGTTATCCCGCAGCCAAAGCGTTATTGGCAGCGGCTGGATTGAAGACGACGGACGTTGG
GACGACTAAAGCCCAACAGTTGAATCAATTAGATTTAGCGCAACTTGCGACCAGCACCGGTGTCGGTGAACTGACCTTAA
AGGATATTATTAGTAGTTTGCAAAAGCCCGGGCGTGATGTTCGTGATACGATGCCCGCACCGTTACTCCGGCAAGACGTT
TTAAAGATGAGTGATCTAAAACCAGGGATGCAGTTGCAAGGAACCGTACGCAACGTGGTCGACTTTGGGGCGTTTGTGGA
TATTGGTGTCAAGCAAGATGGCCTCGTACATGTCTCCAAACTAACGGATAAGTTCTTGAAAGATCCGCGTCAGGCGGTGG
CAGTTGGCGACATCGTAACGGTGTGGGTCGAAGAAGTTGATGAACAGCGGCAGCGCATCGCTTTGACGATGATTGCACCG
GCTGAAGCATAA

Upstream 100 bases:

>100_bases
AGTGACAGTCAACGACAATTTTCAGATGGTCATTCGGCGCGGAAACTTGGGTAAAACGCGTATAATATAATGTAATGAGA
TTAAAAGATTGGGTGAAATA

Downstream 100 bases:

>100_bases
TGACTGATTTAGAGTTACAGCAGCTCGTTGCGACCATTTCCATGCATGATTTTCACCGTCCGTTCCAGCACCGCGCTTAT
TTTAATGCTCGGTTACGAAC

Product: transcription accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNYDRLASLESRKADVMKLIAEQ
DHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKDAGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALA
GAHEILAEAFGDNAGLRNWVRNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS
IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQAIKVFGDNLYHLLMQAPLKGR
VVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAKREAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLK
TMTRPVYYVIVNEAGASVYSASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD
TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGPKAYEQAVGFLRIIDGKNVFD
NTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLAQLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDV
LKMSDLKPGMQLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP
AEA

Sequences:

>Translated_723_residues
MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNYDRLASLESRKADVMKLIAEQ
DHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKDAGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALA
GAHEILAEAFGDNAGLRNWVRNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS
IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQAIKVFGDNLYHLLMQAPLKGR
VVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAKREAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLK
TMTRPVYYVIVNEAGASVYSASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD
TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGPKAYEQAVGFLRIIDGKNVFD
NTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLAQLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDV
LKMSDLKPGMQLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP
AEA
>Mature_723_residues
MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNYDRLASLESRKADVMKLIAEQ
DHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKDAGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALA
GAHEILAEAFGDNAGLRNWVRNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS
IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQAIKVFGDNLYHLLMQAPLKGR
VVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAKREAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLK
TMTRPVYYVIVNEAGASVYSASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD
TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGPKAYEQAVGFLRIIDGKNVFD
NTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLAQLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDV
LKMSDLKPGMQLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP
AEA

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=777, Percent_Identity=33.0759330759331, Blast_Score=397, Evalue=1e-110,
Organism=Homo sapiens, GI27597090, Length=793, Percent_Identity=24.7162673392182, Blast_Score=107, Evalue=3e-23,
Organism=Escherichia coli, GI87082262, Length=713, Percent_Identity=46.8443197755961, Blast_Score=578, Evalue=1e-166,
Organism=Escherichia coli, GI1787140, Length=75, Percent_Identity=41.3333333333333, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=734, Percent_Identity=28.3378746594005, Blast_Score=248, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17552892, Length=605, Percent_Identity=23.3057851239669, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI62484314, Length=754, Percent_Identity=32.0954907161804, Blast_Score=377, Evalue=1e-104,
Organism=Drosophila melanogaster, GI24640080, Length=584, Percent_Identity=22.2602739726027, Blast_Score=88, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 80069; Mature: 80069

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNY
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
DRLASLESRKADVMKLIAEQDHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHH
AGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALAGAHEILAEAFGDNAGLRNWV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH
RNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS
HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCEEEEEE
IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQA
EECCHHCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCH
IKVFGDNLYHLLMQAPLKGRVVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAK
HHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCEEEEEECCCCEEHHEEEECCCCCCCHH
REAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLKTMTRPVYYVIVNEAGASVYS
HHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
ASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHH
TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGP
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHCCCCCH
KAYEQAVGFLRIIDGKNVFDNTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLA
HHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDVLKMSDLKPGMQLQGTVRNVV
HHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
DFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP
HHCCCEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
AEA
CCC
>Mature Secondary Structure
MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNY
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
DRLASLESRKADVMKLIAEQDHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHH
AGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALAGAHEILAEAFGDNAGLRNWV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH
RNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS
HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCEEEEEE
IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQA
EECCHHCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCH
IKVFGDNLYHLLMQAPLKGRVVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAK
HHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCEEEEEECCCCEEHHEEEECCCCCCCHH
REAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLKTMTRPVYYVIVNEAGASVYS
HHHHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHH
ASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHH
TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGP
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHCCCCCH
KAYEQAVGFLRIIDGKNVFDNTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLA
HHHHHHHCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDVLKMSDLKPGMQLQGTVRNVV
HHHHHCCCCHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
DFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP
HHCCCEEECCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
AEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]