Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377450

Identifier: 28377450

GI number: 28377450

Start: 526045

End: 526479

Strand: Direct

Name: 28377450

Synonym: lp_0568

Alternate gene names: NA

Gene position: 526045-526479 (Clockwise)

Preceding gene: 28377449

Following gene: 28377451

Centisome position: 15.9

GC content: 42.53

Gene sequence:

>435_bases
ATGAAAAAAGCAACGATTCAAACGTATATGCCAGTACTGTCTAAAGTTATCGAAAGTACTGAAAAAATGGGGGAAGAATT
AAACCCATCTTTTGAAAAACTACGTCAGGCCATTGATAATGACGCAGTTGCCAAAATGGTTCCAGCTGAATTCAATGATA
TTCAGATGGAATTTAGCGATGGTACTGAACAGTATCAACAAAATTTGGCACAGTTGAAAAAAGTTGCGGTACCCGCACGG
TTAATGGGGCGGCACCGTAATTTGTTAGCAGCATACGAAGCCTACACGAATGCGTGTGCGGCCATGACGGCTAGCATGAA
CATCGACGATCAAACGATTGATGTGGCTGCTTTTAATCAGGCTGAAACGGATCAAGAGACTGAAATGGGCCGCGTTTCAA
ATAACGTGCAACGGATCATGAATACAGTCATGTAG

Upstream 100 bases:

>100_bases
TGAAATTGTTAAGTTCTTCCAACGTCGACACATGCGGCGCGCATAACCCATCCATTAGGGGTAAAATAAGGCTAACTAAT
TTAAAGAAAAGAGTTTGTAC

Downstream 100 bases:

>100_bases
GAGCGCTAATCTGGGTGATTGGATTTAGCACACTAATAAAACGCTCGGTAACGTTTATGCGTTGCCGAGCGTTTTATTGT
TGGTTGCGGGGCAGCCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKATIQTYMPVLSKVIESTEKMGEELNPSFEKLRQAIDNDAVAKMVPAEFNDIQMEFSDGTEQYQQNLAQLKKVAVPAR
LMGRHRNLLAAYEAYTNACAAMTASMNIDDQTIDVAAFNQAETDQETEMGRVSNNVQRIMNTVM

Sequences:

>Translated_144_residues
MKKATIQTYMPVLSKVIESTEKMGEELNPSFEKLRQAIDNDAVAKMVPAEFNDIQMEFSDGTEQYQQNLAQLKKVAVPAR
LMGRHRNLLAAYEAYTNACAAMTASMNIDDQTIDVAAFNQAETDQETEMGRVSNNVQRIMNTVM
>Mature_144_residues
MKKATIQTYMPVLSKVIESTEKMGEELNPSFEKLRQAIDNDAVAKMVPAEFNDIQMEFSDGTEQYQQNLAQLKKVAVPAR
LMGRHRNLLAAYEAYTNACAAMTASMNIDDQTIDVAAFNQAETDQETEMGRVSNNVQRIMNTVM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16159; Mature: 16159

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKATIQTYMPVLSKVIESTEKMGEELNPSFEKLRQAIDNDAVAKMVPAEFNDIQMEFSD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCHHEEEECC
GTEQYQQNLAQLKKVAVPARLMGRHRNLLAAYEAYTNACAAMTASMNIDDQTIDVAAFNQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
AETDQETEMGRVSNNVQRIMNTVM
CCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKKATIQTYMPVLSKVIESTEKMGEELNPSFEKLRQAIDNDAVAKMVPAEFNDIQMEFSD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCCCCHHEEEECC
GTEQYQQNLAQLKKVAVPARLMGRHRNLLAAYEAYTNACAAMTASMNIDDQTIDVAAFNQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
AETDQETEMGRVSNNVQRIMNTVM
CCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA