| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377440
Identifier: 28377440
GI number: 28377440
Start: 513299
End: 514141
Strand: Direct
Name: 28377440
Synonym: lp_0557
Alternate gene names: NA
Gene position: 513299-514141 (Clockwise)
Preceding gene: 28377439
Following gene: 28377443
Centisome position: 15.52
GC content: 49.35
Gene sequence:
>843_bases ATGCCGCTGTATACGTTTATTGGTGATATTCATAGTGCCGCGGATGATCTGGCAGTTTTATTAGCCGATCCTGAAGTTGC CGCGACGCGCTTGATTTTCTTGGGCGATTATATTGATGGTACGGCGGCACGCTATTTTGGTCATGCCACCGAGTCAGCTC CGTTGGCGCCGCTAAAAGTACTGACGATGGTTAGAAAACGGGTACGGGAATACGGCGATGTGGCTTTACTTGGCAATCAT GATGAATTTTGGCTACGGACAGCTCATGGTGATGACAATGCCACCGCAACTTGGGTGTTGAACGGTGGTCACCGGACCTG GCGCAAATTAGGGATTTACTCCTCCAATCCCAATCATGTTCGGCGGGCATTAAATGGTGCGCTATTAAAGCCGGATACTG ATTTCTTAGCACATTTGCCGCTGATGTGGCAACATGGTCGGTTACTGGCTATGCACGCGGGTGTTAACTGGCAATACCCA TTAACACAACAAACAACGACTGACCTACTGTGGATTCGGGATGACTATTATGATGACTTCACGACTGGCAGTCACCGTTG GCATCGGAACTTATTCAATAAAGTCATCATTACTGGTCATACGCCGGTGCAGACCTTGACTGGTTCACACACTGGTTATT TAAAGATGCAGGCAGATGCGCAAGACGTTCCACGATATCTAATTGATGCAGGCAGTCGTTCAGGCCTGTTTGATGGTGGA ATTTGTGCGTTAACGCTGACGGTCGATGGTGAATTTGTCAGGGCGAAACGCGTGATCAAGGGTCACCGCTACGATGGTCA GCAAATCGTCACTCCGGCCATGTTGGTGGATCAGGCGCACTAA
Upstream 100 bases:
>100_bases GCCCGGCACGCGTTATATGCCGTTCAAGGATTTCAGATGTTATTGGTGGTCGTTAAACCCGACTAATGCACGTGGTTATC GATGAGACGGAGGGAGTAAT
Downstream 100 bases:
>100_bases GTATCACTAAACATCTCAGAGATAGAACGTAAAAGGAGCAGGCTCACATGATATTGAGACTGCTCCTTTTATGATGTCAC GCTAGTTACTGGTTTTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Diadenosine Tetraphosphatase-Like Protein; Serine-Threonine Protein Phosphatase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPLYTFIGDIHSAADDLAVLLADPEVAATRLIFLGDYIDGTAARYFGHATESAPLAPLKVLTMVRKRVREYGDVALLGNH DEFWLRTAHGDDNATATWVLNGGHRTWRKLGIYSSNPNHVRRALNGALLKPDTDFLAHLPLMWQHGRLLAMHAGVNWQYP LTQQTTTDLLWIRDDYYDDFTTGSHRWHRNLFNKVIITGHTPVQTLTGSHTGYLKMQADAQDVPRYLIDAGSRSGLFDGG ICALTLTVDGEFVRAKRVIKGHRYDGQQIVTPAMLVDQAH
Sequences:
>Translated_280_residues MPLYTFIGDIHSAADDLAVLLADPEVAATRLIFLGDYIDGTAARYFGHATESAPLAPLKVLTMVRKRVREYGDVALLGNH DEFWLRTAHGDDNATATWVLNGGHRTWRKLGIYSSNPNHVRRALNGALLKPDTDFLAHLPLMWQHGRLLAMHAGVNWQYP LTQQTTTDLLWIRDDYYDDFTTGSHRWHRNLFNKVIITGHTPVQTLTGSHTGYLKMQADAQDVPRYLIDAGSRSGLFDGG ICALTLTVDGEFVRAKRVIKGHRYDGQQIVTPAMLVDQAH >Mature_279_residues PLYTFIGDIHSAADDLAVLLADPEVAATRLIFLGDYIDGTAARYFGHATESAPLAPLKVLTMVRKRVREYGDVALLGNHD EFWLRTAHGDDNATATWVLNGGHRTWRKLGIYSSNPNHVRRALNGALLKPDTDFLAHLPLMWQHGRLLAMHAGVNWQYPL TQQTTTDLLWIRDDYYDDFTTGSHRWHRNLFNKVIITGHTPVQTLTGSHTGYLKMQADAQDVPRYLIDAGSRSGLFDGGI CALTLTVDGEFVRAKRVIKGHRYDGQQIVTPAMLVDQAH
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31355; Mature: 31224
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLYTFIGDIHSAADDLAVLLADPEVAATRLIFLGDYIDGTAARYFGHATESAPLAPLKV CCHHHHHHHHHHCCCCEEEEEECCCHHHEEEEEEECCCCCHHHHHHCCCCCCCCCCHHHH LTMVRKRVREYGDVALLGNHDEFWLRTAHGDDNATATWVLNGGHRTWRKLGIYSSNPNHV HHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHEECCCCCCHHHH RRALNGALLKPDTDFLAHLPLMWQHGRLLAMHAGVNWQYPLTQQTTTDLLWIRDDYYDDF HHHHCCCEECCCHHHHHHCCCEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC TTGSHRWHRNLFNKVIITGHTPVQTLTGSHTGYLKMQADAQDVPRYLIDAGSRSGLFDGG CCCCHHHHHHHHHEEEEECCCCHHEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCC ICALTLTVDGEFVRAKRVIKGHRYDGQQIVTPAMLVDQAH EEEEEEEECCHHHHHHHHHHCCCCCCCEEECHHHHHCCCC >Mature Secondary Structure PLYTFIGDIHSAADDLAVLLADPEVAATRLIFLGDYIDGTAARYFGHATESAPLAPLKV CHHHHHHHHHHCCCCEEEEEECCCHHHEEEEEEECCCCCHHHHHHCCCCCCCCCCHHHH LTMVRKRVREYGDVALLGNHDEFWLRTAHGDDNATATWVLNGGHRTWRKLGIYSSNPNHV HHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCHHHHEECCCCCCHHHH RRALNGALLKPDTDFLAHLPLMWQHGRLLAMHAGVNWQYPLTQQTTTDLLWIRDDYYDDF HHHHCCCEECCCHHHHHHCCCEECCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCC TTGSHRWHRNLFNKVIITGHTPVQTLTGSHTGYLKMQADAQDVPRYLIDAGSRSGLFDGG CCCCHHHHHHHHHEEEEECCCCHHEECCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCC ICALTLTVDGEFVRAKRVIKGHRYDGQQIVTPAMLVDQAH EEEEEEEECCHHHHHHHHHHCCCCCCCEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA