Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 77747711
Identifier: 77747711
GI number: 77747711
Start: 2095304
End: 2096428
Strand: Reverse
Name: 77747711
Synonym: PD1795
Alternate gene names: NA
Gene position: 2096428-2095304 (Counterclockwise)
Preceding gene: 28199670
Following gene: 28199665
Centisome position: 83.2
GC content: 56.98
Gene sequence:
>1125_bases GTGCCTGCCAGTGCGACGCAGACCCCCACCAATACCCGCTGTATTTTGCTCATTGATACTGTGCCCCCGCGTCCAGACCG CGATTCAGGCTCATTGCGCTGCCATCATTTAATGCATTTGATGGTTTGCATGGGCTATAACGTGGTGCTGCACTGCCAGG AACGCATGCCAAGCGCTGCGGAGATCATGGCATTACGTGCGATCGGCGTTACAACCACCGCCGTTGCGGGTGGCTTCCCA TCCTGGCTCCTGACCAACCCAGAGCGTTATTGTGCTGTTGTAGTTTGTCGTTACCACCTTGGCCTGTCTTGGTTGCCCTT ACTACGAACCTTCGTACCTGACAGCCTTTGCATCTTGGATACAGTCGATTTACACCACCTGCGTGAGCAACGCGAAGCCG AGTTACGCAATCTGAGTGGCCTGCGTGCTGCTGCGGCCATCACGCGCCGCCATGAATTGCATGCGATCAGTTGCGCTGAT CTAGTGTGGGTGGTGAGTCCTGTTGAACGCGACTATTTGGGCAGATTGCTGCCGCAGGCGCGTGTTGAGGTGGTACCGAA CATGCATGACATGGTCGAGACGATTCCTCCGTTCGTGTCCCGGCATGGTTTTCTGTTCGTCGGGGGGAGTCGTCATCCAC CCAATGTGGATGCAGTTCGCTGGCTGCTGTCTGAGATTTTCCCACGCATCCGTGAACGGCTACCTGATGCACAGTTGCAC TTGGTGGGTGCCGGACTGGCTGAAGCGATACAGAGTCAGCAGATGATATGTCCCGGAGTCAGTTTCCACGGTCATGTGCC ACAGATGGCACCTTTACTCCACGCCTGCCGAGTCAGCCTTGCTCCGCTGCGCTTTGGTGCCGGTGTCAAAGGTAAGATCA GTGAGGCCTTGGCCTACGGTCTGCCCGTGGTGACGACACCTGAGGGAGCCGAAGGCATGTACCTGCGCTCCGGTATGGAT GCCTTAATCAGCCGCGATGCCGAAGACTTGGCCAGACAGGCAGTGTGTGCACATGAAGATCTGGAGGTGTGGCAACGCCT CTCAGACAATGGGCAACAGATCATCAAGCAGCACTTCTCGCTGCACAGTACGCGTGCTGCTCTGGCGGCCATGCTTCCCC ATTGA
Upstream 100 bases:
>100_bases TGCTCGTATTGCGTTGTATTCCCGCCGTTTCGGGCAGTGGATCCAGTTGCGTGCTGCTGTTTCTGCTGACCAGTCAGCAC CGCCCAGTGTTGCTGCTGTT
Downstream 100 bases:
>100_bases AGGATTACTCTAGAGTCATTTATGTCACTGTCTCGGATTACCGCGTTGATTGCTCGCCATGATCGCCTCAAGCGTCTGAT GGTGCGCTTACTGTCTTGCG
Product: sugar transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family Protein; Sugar Transferase; A-Glycosyltransferase; Glycosyl Transferase Protein; Glycosyltransferase Group 1 Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Methyltransferase And Glycosyltransferase; Glycosyltransferase Family 4 Protein; Polysaccharide Biosynthesis Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAAEIMALRAIGVTTTAVAGGFP SWLLTNPERYCAVVVCRYHLGLSWLPLLRTFVPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCAD LVWVVSPVERDYLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLH LVGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGMD ALISRDAEDLARQAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAALAAMLPH
Sequences:
>Translated_374_residues MPASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAAEIMALRAIGVTTTAVAGGFP SWLLTNPERYCAVVVCRYHLGLSWLPLLRTFVPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCAD LVWVVSPVERDYLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLH LVGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGMD ALISRDAEDLARQAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAALAAMLPH >Mature_373_residues PASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAAEIMALRAIGVTTTAVAGGFPS WLLTNPERYCAVVVCRYHLGLSWLPLLRTFVPDSLCILDTVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADL VWVVSPVERDYLGRLLPQARVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLHL VGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGMDA LISRDAEDLARQAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAALAAMLPH
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41323; Mature: 41191
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAA CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEHHHCCCHH EIMALRAIGVTTTAVAGGFPSWLLTNPERYCAVVVCRYHLGLSWLPLLRTFVPDSLCILD HHHHHHHHCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHH TVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERDYLGRLLPQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH RVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLH HHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE LVGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYG EEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC LPVVTTPEGAEGMYLRSGMDALISRDAEDLARQAVCAHEDLEVWQRLSDNGQQIIKQHFS CCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LHSTRAALAAMLPH HHHHHHHHHHHCCC >Mature Secondary Structure PASATQTPTNTRCILLIDTVPPRPDRDSGSLRCHHLMHLMVCMGYNVVLHCQERMPSAA CCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEHHHCCCHH EIMALRAIGVTTTAVAGGFPSWLLTNPERYCAVVVCRYHLGLSWLPLLRTFVPDSLCILD HHHHHHHHCCHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEHH TVDLHHLREQREAELRNLSGLRAAAAITRRHELHAISCADLVWVVSPVERDYLGRLLPQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHH RVEVVPNMHDMVETIPPFVSRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLH HHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE LVGAGLAEAIQSQQMICPGVSFHGHVPQMAPLLHACRVSLAPLRFGAGVKGKISEALAYG EEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC LPVVTTPEGAEGMYLRSGMDALISRDAEDLARQAVCAHEDLEVWQRLSDNGQQIIKQHFS CCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LHSTRAALAAMLPH HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA