| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199700
Identifier: 28199700
GI number: 28199700
Start: 2140132
End: 2140413
Strand: Reverse
Name: 28199700
Synonym: PD1831
Alternate gene names: NA
Gene position: 2140413-2140132 (Counterclockwise)
Preceding gene: 28199703
Following gene: 28199694
Centisome position: 84.94
GC content: 56.38
Gene sequence:
>282_bases GTGATGTGCAGTGCACACCGACACACAGATGGTAGGGGGCTATGTGGCGGGTATCCCTTTCCTGCTGTCTTGTACGGCGG TGATGGGGCGCCAGTCATTGTGCAGGCGCTGGTGTGGCTGGGTCCGCTAGCTGGGGATGGAGGCATCCATGAGGTGCTGT TCATAGACAGTGTTGATGGCGCTGTTGCCATTGGGGCAGTGGTGTTGCGTGGTGACACGTTGCGTGAAATATCAATCTAT CCATCTGTGCAATGCATTGGTGATGCGTTGGGTGGCTGTTGA
Upstream 100 bases:
>100_bases TGAGCAGCGCAATCCCCGCGGTATGAGTGATAAAGCGCAGCAGGGTGCGGCGACTCAGGCGCTGCTGGAGGGGGAAGGGA GGCAATGGTGATGTCATGGG
Downstream 100 bases:
>100_bases TGCTGGTGTGCGTGGCTGTGAGTGTTGCTGGGGTCATCTTCGCGGATTCTTCACACGAGGGGATGTGCTGTCGGGCACAG TACGCACCAAATTATTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MMCSAHRHTDGRGLCGGYPFPAVLYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIY PSVQCIGDALGGC
Sequences:
>Translated_93_residues MMCSAHRHTDGRGLCGGYPFPAVLYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIY PSVQCIGDALGGC >Mature_93_residues MMCSAHRHTDGRGLCGGYPFPAVLYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIY PSVQCIGDALGGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9467; Mature: 9467
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMCSAHRHTDGRGLCGGYPFPAVLYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDG CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCC AVAIGAVVLRGDTLREISIYPSVQCIGDALGGC CCEEEEEEECCCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MMCSAHRHTDGRGLCGGYPFPAVLYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDG CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCC AVAIGAVVLRGDTLREISIYPSVQCIGDALGGC CCEEEEEEECCCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA