| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is met2 [H]
Identifier: 28199684
GI number: 28199684
Start: 2117733
End: 2118770
Strand: Reverse
Name: met2 [H]
Synonym: PD1813
Alternate gene names: 28199684
Gene position: 2118770-2117733 (Counterclockwise)
Preceding gene: 28199686
Following gene: 28199683
Centisome position: 84.08
GC content: 54.05
Gene sequence:
>1038_bases TTGCTGGAGACTGCTATGAGATCCGTAAATCCCTCATTCACTTTTTGTCTTGATATGCCCACTCCCGACGATGATGGCCA GATTGCTGTGCGCGGTGAAATCATGGTGCCTTTGTCGATGTGCCATGCCGGATGGGTCGATCTGCGTTTGCGTTATGAGT TGATTGGCTGTGCTGCTGGGCCGGTGGTGTTTGTGCTTGGTGGTATCTCTGCACATCGCCATATTGCTGCGACCGCTCGT TTCCCGGAGAAGGGCTGGCTTGAAGGGTTGGTTGGTACGGAGCGTGCATTGAATCCGGAGCGTTTCCGGCTGCTTTCGTT CGATTTTCTAGGTGCTGATGGCCAACTTGATGTGCCCATTGATACCGCCGATCAGGCGGATGCGATTGCTCTGTTGTTGG AGAGGCTGGGGATTGCTACGTTGTATGGTTTCGTCGGTTATTCATATGGTGCGCTTGTTGGTTTGCAGTTTGCGATCCGT CATTCAGAGCGGGTACGTCGCATGATCGTGGTTAGTGGCGCACATCGAGCACACCCTTATGCAGCGGCTTGGCGTGCATT GCAGCGCCGTGCGGTAGCGTTGGGGCAGTTGCAGTGTGCTGAGCATCAGGGTTTAGCATTGGCACGGCAGCTTGCGATGC TGAGTTACCGTACTCCCGAGGAGTTTGAGGAGCGTTTTGATGTGGCGGCGCAAGTGATCAACGGTCGTGTGCGTGTGGCG GCTGAGGATTATCTAGACGCTGTTGGCGCTCAGTATGTGGCGTGTACTCCGGTCAACGCTTATATGCGTCTGTCCGAATC GATTGATTTACACCGTGTGGACCCAACGCAGGTGGTGGTGCCTACGGTGGTGGTTGCCGTTGAGGGGGATCGTTTGGTGC CGCTGTCCGATCTTGTTGCACTGATTGAGGGTTTAGGCCCGTGCGGCAGTTTGCGGGTGTTGCGTTCTCCTTACGGTCAC GATGCTTTTTTAAAAGAAACTAATCGCATTGATGCGATTCTTACGACAGCGCTACGTCCTATAGGAGAATCCATATGA
Upstream 100 bases:
>100_bases GGAATTCAGTGTGGACTTCCGCGTCTGCTAAAGGAGGGGGTAACTCCGTGCCCTTTGCTTGACGCACCTGGCTTTCTATC AAGCTCGATGGGTCGTTGCT
Downstream 100 bases:
>100_bases GCATTCATGATGTGCACGAAGGCACGTGTCACGTGACCACTTCCGCGGTGCGTGCTGGGATCGATTCCGACACTGCTCAT GGGGCAGTGACGCCACCGAT
Product: homoserine O-acetyltransferase
Products: NA
Alternate protein names: Homoserine O-trans-acetylase; HTA; Homoserine transacetylase [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLETAMRSVNPSFTFCLDMPTPDDDGQIAVRGEIMVPLSMCHAGWVDLRLRYELIGCAAGPVVFVLGGISAHRHIAATAR FPEKGWLEGLVGTERALNPERFRLLSFDFLGADGQLDVPIDTADQADAIALLLERLGIATLYGFVGYSYGALVGLQFAIR HSERVRRMIVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEHQGLALARQLAMLSYRTPEEFEERFDVAAQVINGRVRVA AEDYLDAVGAQYVACTPVNAYMRLSESIDLHRVDPTQVVVPTVVVAVEGDRLVPLSDLVALIEGLGPCGSLRVLRSPYGH DAFLKETNRIDAILTTALRPIGESI
Sequences:
>Translated_345_residues MLETAMRSVNPSFTFCLDMPTPDDDGQIAVRGEIMVPLSMCHAGWVDLRLRYELIGCAAGPVVFVLGGISAHRHIAATAR FPEKGWLEGLVGTERALNPERFRLLSFDFLGADGQLDVPIDTADQADAIALLLERLGIATLYGFVGYSYGALVGLQFAIR HSERVRRMIVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEHQGLALARQLAMLSYRTPEEFEERFDVAAQVINGRVRVA AEDYLDAVGAQYVACTPVNAYMRLSESIDLHRVDPTQVVVPTVVVAVEGDRLVPLSDLVALIEGLGPCGSLRVLRSPYGH DAFLKETNRIDAILTTALRPIGESI >Mature_345_residues MLETAMRSVNPSFTFCLDMPTPDDDGQIAVRGEIMVPLSMCHAGWVDLRLRYELIGCAAGPVVFVLGGISAHRHIAATAR FPEKGWLEGLVGTERALNPERFRLLSFDFLGADGQLDVPIDTADQADAIALLLERLGIATLYGFVGYSYGALVGLQFAIR HSERVRRMIVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEHQGLALARQLAMLSYRTPEEFEERFDVAAQVINGRVRVA AEDYLDAVGAQYVACTPVNAYMRLSESIDLHRVDPTQVVVPTVVVAVEGDRLVPLSDLVALIEGLGPCGSLRVLRSPYGH DAFLKETNRIDAILTTALRPIGESI
Specific function: Unknown
COG id: COG2021
COG function: function code E; Homoserine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. HTA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR008220 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =2.3.1.31 [H]
Molecular weight: Translated: 37673; Mature: 37673
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLETAMRSVNPSFTFCLDMPTPDDDGQIAVRGEIMVPLSMCHAGWVDLRLRYELIGCAAG CCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHHHCCCCEEEEEEEEEEECCCC PVVFVLGGISAHRHIAATARFPEKGWLEGLVGTERALNPERFRLLSFDFLGADGQLDVPI CEEEEECCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCHHHEEEEEEEEECCCCEEECCC DTADQADAIALLLERLGIATLYGFVGYSYGALVGLQFAIRHSERVRRMIVVSGAHRAHPY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHH AAAWRALQRRAVALGQLQCAEHQGLALARQLAMLSYRTPEEFEERFDVAAQVINGRVRVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE AEDYLDAVGAQYVACTPVNAYMRLSESIDLHRVDPTQVVVPTVVVAVEGDRLVPLSDLVA HHHHHHHHCCCEEEECCHHHHHHHHCCCCEEECCCCEEEEEEEEEEECCCCCCCHHHHHH LIEGLGPCGSLRVLRSPYGHDAFLKETNRIDAILTTALRPIGESI HHHCCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLETAMRSVNPSFTFCLDMPTPDDDGQIAVRGEIMVPLSMCHAGWVDLRLRYELIGCAAG CCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEEEHHHHCCCCEEEEEEEEEEECCCC PVVFVLGGISAHRHIAATARFPEKGWLEGLVGTERALNPERFRLLSFDFLGADGQLDVPI CEEEEECCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCHHHEEEEEEEEECCCCEEECCC DTADQADAIALLLERLGIATLYGFVGYSYGALVGLQFAIRHSERVRRMIVVSGAHRAHPY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHH AAAWRALQRRAVALGQLQCAEHQGLALARQLAMLSYRTPEEFEERFDVAAQVINGRVRVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE AEDYLDAVGAQYVACTPVNAYMRLSESIDLHRVDPTQVVVPTVVVAVEGDRLVPLSDLVA HHHHHHHHCCCEEEECCHHHHHHHHCCCCEEECCCCEEEEEEEEEEECCCCCCCHHHHHH LIEGLGPCGSLRVLRSPYGHDAFLKETNRIDAILTTALRPIGESI HHHCCCCCCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA