Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28199665
Identifier: 28199665
GI number: 28199665
Start: 2095052
End: 2095282
Strand: Reverse
Name: 28199665
Synonym: PD1794
Alternate gene names: NA
Gene position: 2095282-2095052 (Counterclockwise)
Preceding gene: 77747711
Following gene: 28199664
Centisome position: 83.15
GC content: 54.55
Gene sequence:
>231_bases ATGTCACTGTCTCGGATTACCGCGTTGATTGCTCGCCATGATCGCCTCAAGCGTCTGATGGTGCGCTTACTGTCTTGCGT TCCAGCGGTGGATGTTTGGCTTAGGCATCATGTGAGTGCGCGTAAATATCGTCGTTCCTTGCTCGACGTCGGTGAGGCGG ATTTGCCTGAGGTGGCCCTATCCGTCTACCGACAGTTGCTGATTGCAGCAGGCAAGGATGGCCATTTGTGA
Upstream 100 bases:
>100_bases CAATGGGCAACAGATCATCAAGCAGCACTTCTCGCTGCACAGTACGCGTGCTGCTCTGGCGGCCATGCTTCCCCATTGAA GGATTACTCTAGAGTCATTT
Downstream 100 bases:
>100_bases AATTGGTCATTGATTTGCTTGGCGCGCAGACGCGTAGCCATCTGCGTGGTATCGGCCGTTATACCCGTGAACTGACAAAG GCACTGCTGCGCCAAGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSLSRITALIARHDRLKRLMVRLLSCVPAVDVWLRHHVSARKYRRSLLDVGEADLPEVALSVYRQLLIAAGKDGHL
Sequences:
>Translated_76_residues MSLSRITALIARHDRLKRLMVRLLSCVPAVDVWLRHHVSARKYRRSLLDVGEADLPEVALSVYRQLLIAAGKDGHL >Mature_75_residues SLSRITALIARHDRLKRLMVRLLSCVPAVDVWLRHHVSARKYRRSLLDVGEADLPEVALSVYRQLLIAAGKDGHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8627; Mature: 8496
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRITALIARHDRLKRLMVRLLSCVPAVDVWLRHHVSARKYRRSLLDVGEADLPEVAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SVYRQLLIAAGKDGHL HHHHHHHHHCCCCCCC >Mature Secondary Structure SLSRITALIARHDRLKRLMVRLLSCVPAVDVWLRHHVSARKYRRSLLDVGEADLPEVAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SVYRQLLIAAGKDGHL HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA