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The map label for this gene is petA [H]

Identifier: 28199648

GI number: 28199648

Start: 2068221

End: 2068853

Strand: Reverse

Name: petA [H]

Synonym: PD1777

Alternate gene names: 28199648

Gene position: 2068853-2068221 (Counterclockwise)

Preceding gene: 28199649

Following gene: 28199647

Centisome position: 82.1

GC content: 54.98

Gene sequence:

>633_bases
ATGGTGAAGGGTGGGGGGCATGGATCCAGTGATTTAAAGAGGCGACGTTTTCTTACTGCGGTGACGACGTTGGTTGGTAC
GGTCGGTGCAGGGTTTGTCTCGGTGCCTTTTTTCAAGTCATTAGGTCTCAGTCCTAAGAGTAAATTGGCGGGCGCGTCGG
TGGTTGTTGATGTCGGTGGGTTGCAAGAAGGTCAGCGTTTGATTCTGGAGTGGCGTGGTCAGCCGGTCTGGGTGGTTAGG
CGTTCTAAGGCAGTTCTTGATGCGTTGCCAGGATTGAGTGGGCGCTTGAAGGATCCAATGTCCGAGGTGAAGAGTCAGCA
GCCAGCGTATGTGCTTCACAATACTGATTTGCGTTCGATCAGGCCGGAGATTTCGGTGTTGGTGGGTGTGTGTACGCACT
TAGGGTGTTCGCCGCAGATGATGGCCGAGATCCGCCCGGAGTCGTTCGATCCAGAATGGAAGGGGGGGTATTTTTGTCCT
TGTCACAAGTCGCGTTTTGACATGTCAGGGCGGGTGTTCCGTGGGATGCCGGCTCCAATCAATTTGTTGGTGCCACCGCA
TCATTACCGCGATGAGCGGACGCTTGTGATCGGTGTGGGTCCGGAAAGTGTCCATCGGGCAGGGGACGTTTGA

Upstream 100 bases:

>100_bases
GTGTACGACGGTCATTTTTCGCGATGCGCTTCATGGGCCGTCGTGTGGTGTTTCTTCAGTGGTGCATTGGCAGGTTTCGG
GATGATTTGAGGAGCGCTGC

Downstream 100 bases:

>100_bases
ATTCATGAGAAACATCATTGCTCGTGGTGTCCGAGGGGTGGTGGATTGGGTCGGTGCGCGTGTTCCGGGATTAGTGTTGT
TTTATAGGAATCACTTCACG

Product: ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MVKGGGHGSSDLKRRRFLTAVTTLVGTVGAGFVSVPFFKSLGLSPKSKLAGASVVVDVGGLQEGQRLILEWRGQPVWVVR
RSKAVLDALPGLSGRLKDPMSEVKSQQPAYVLHNTDLRSIRPEISVLVGVCTHLGCSPQMMAEIRPESFDPEWKGGYFCP
CHKSRFDMSGRVFRGMPAPINLLVPPHHYRDERTLVIGVGPESVHRAGDV

Sequences:

>Translated_210_residues
MVKGGGHGSSDLKRRRFLTAVTTLVGTVGAGFVSVPFFKSLGLSPKSKLAGASVVVDVGGLQEGQRLILEWRGQPVWVVR
RSKAVLDALPGLSGRLKDPMSEVKSQQPAYVLHNTDLRSIRPEISVLVGVCTHLGCSPQMMAEIRPESFDPEWKGGYFCP
CHKSRFDMSGRVFRGMPAPINLLVPPHHYRDERTLVIGVGPESVHRAGDV
>Mature_210_residues
MVKGGGHGSSDLKRRRFLTAVTTLVGTVGAGFVSVPFFKSLGLSPKSKLAGASVVVDVGGLQEGQRLILEWRGQPVWVVR
RSKAVLDALPGLSGRLKDPMSEVKSQQPAYVLHNTDLRSIRPEISVLVGVCTHLGCSPQMMAEIRPESFDPEWKGGYFCP
CHKSRFDMSGRVFRGMPAPINLLVPPHHYRDERTLVIGVGPESVHRAGDV

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=198, Percent_Identity=31.8181818181818, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17540418, Length=192, Percent_Identity=34.375, Blast_Score=100, Evalue=7e-22,
Organism=Saccharomyces cerevisiae, GI6320811, Length=181, Percent_Identity=29.8342541436464, Blast_Score=88, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24580896, Length=163, Percent_Identity=36.1963190184049, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 22865; Mature: 22865

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKGGGHGSSDLKRRRFLTAVTTLVGTVGAGFVSVPFFKSLGLSPKSKLAGASVVVDVGG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCEEEEECCC
LQEGQRLILEWRGQPVWVVRRSKAVLDALPGLSGRLKDPMSEVKSQQPAYVLHNTDLRSI
CCCCCEEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHH
RPEISVLVGVCTHLGCSPQMMAEIRPESFDPEWKGGYFCPCHKSRFDMSGRVFRGMPAPI
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCE
NLLVPPHHYRDERTLVIGVGPESVHRAGDV
EEEECCCCCCCCEEEEEECCHHHHHHCCCC
>Mature Secondary Structure
MVKGGGHGSSDLKRRRFLTAVTTLVGTVGAGFVSVPFFKSLGLSPKSKLAGASVVVDVGG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHCCCCEEEEECCC
LQEGQRLILEWRGQPVWVVRRSKAVLDALPGLSGRLKDPMSEVKSQQPAYVLHNTDLRSI
CCCCCEEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCHHHH
RPEISVLVGVCTHLGCSPQMMAEIRPESFDPEWKGGYFCPCHKSRFDMSGRVFRGMPAPI
HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCE
NLLVPPHHYRDERTLVIGVGPESVHRAGDV
EEEECCCCCCCCEEEEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA