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The map label for this gene is yfiH [C]

Identifier: 28199625

GI number: 28199625

Start: 2043239

End: 2044021

Strand: Reverse

Name: yfiH [C]

Synonym: PD1754

Alternate gene names: 28199625

Gene position: 2044021-2043239 (Counterclockwise)

Preceding gene: 28199626

Following gene: 28199624

Centisome position: 81.12

GC content: 58.62

Gene sequence:

>783_bases
ATGGGTAAGTTTCCATCTTGGGTGTTAGTGGCGGATTGGCCGCCGCCGCCCGGTGTCATGGCATTGAGCACGTTGCGCGA
TGGGCCTGGTGTATCCGTAGCACCATTTGATCGGTTGAATCTGGGGAACTGTAGTGGCGTTGCAGGTGATGCTCCTGTGT
GTGTGGAGCGGAATCGGTCGCGTTTGGTCCAGATGCTGGGGTTACCGTCGGTGCCGCACTGGTTGCGGCAAGTGCATGGT
GTGGAGGTGTTGCGTGTCGATGTGCTTCCGCAGTCGATCGCTCGTGTGGTTGAGCCGACGGCTGATGCTGCGGTGACCAG
TGTGGCTGGGGCGGTCTTGGTGATTTTGACTGCGGATTGTTTGCCGGTCGTCTTGGCTGCTGTTGATGGGAGTGAGATCG
GTGTTGTACACGCTGGTTGGCGTGGTTTGGCTGATGATGTGTTGGAGCGCACGGTGGCTGCGTTGCGGACGTCGCCAGAG
TGTTTGCAGGCGTGGCTTGGGCCTGCGGCTGGTCCACAGGCCTATGAGGTTGGTGTGGATGTGTATGCAGCGTTCGTTGA
GCGGGACTCGGGTGCAGCTTGTGCTTTTTCAGTGACCCGTCCCGGGCATTGGTATGTTGATCTGTATGCGTTGGCACGAC
AGCGTTTGATGCGTGCGGGGCTGTCGGCAGTTTCTATTTATGGGGGGGGCTTATGCACAATCTCCGATCCGCAGCGATTT
TTCTCTCACCGCCGTGATCGGCGCAGCGGACGTTTTGCCACGTTGGCGTGGATTGGGTGTTAA

Upstream 100 bases:

>100_bases
CCTGTGCGTATTGTTGCGCCGGTGCCAGAGGATTTATGTCAGCTTCTTGCGGCGCTGCGTGAGGACAGTGCGCTGTTCTT
TGAGCGGGAGTGGCGTTGAG

Downstream 100 bases:

>100_bases
TGCGTGTCTCTCTTCATTCCATCGGGTGGTGGATGGCTGGGGTATGTGCTGTGTGGTTGGTGGGTGTACGGTGCGTGGAG
CTGGTGCGGTAGGGGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGKFPSWVLVADWPPPPGVMALSTLRDGPGVSVAPFDRLNLGNCSGVAGDAPVCVERNRSRLVQMLGLPSVPHWLRQVHG
VEVLRVDVLPQSIARVVEPTADAAVTSVAGAVLVILTADCLPVVLAAVDGSEIGVVHAGWRGLADDVLERTVAALRTSPE
CLQAWLGPAAGPQAYEVGVDVYAAFVERDSGAACAFSVTRPGHWYVDLYALARQRLMRAGLSAVSIYGGGLCTISDPQRF
FSHRRDRRSGRFATLAWIGC

Sequences:

>Translated_260_residues
MGKFPSWVLVADWPPPPGVMALSTLRDGPGVSVAPFDRLNLGNCSGVAGDAPVCVERNRSRLVQMLGLPSVPHWLRQVHG
VEVLRVDVLPQSIARVVEPTADAAVTSVAGAVLVILTADCLPVVLAAVDGSEIGVVHAGWRGLADDVLERTVAALRTSPE
CLQAWLGPAAGPQAYEVGVDVYAAFVERDSGAACAFSVTRPGHWYVDLYALARQRLMRAGLSAVSIYGGGLCTISDPQRF
FSHRRDRRSGRFATLAWIGC
>Mature_259_residues
GKFPSWVLVADWPPPPGVMALSTLRDGPGVSVAPFDRLNLGNCSGVAGDAPVCVERNRSRLVQMLGLPSVPHWLRQVHGV
EVLRVDVLPQSIARVVEPTADAAVTSVAGAVLVILTADCLPVVLAAVDGSEIGVVHAGWRGLADDVLERTVAALRTSPEC
LQAWLGPAAGPQAYEVGVDVYAAFVERDSGAACAFSVTRPGHWYVDLYALARQRLMRAGLSAVSIYGGGLCTISDPQRFF
SHRRDRRSGRFATLAWIGC

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family

Homologues:

Organism=Escherichia coli, GI1788945, Length=254, Percent_Identity=45.2755905511811, Blast_Score=207, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1754_XYLFT (Q87AR8)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_779939.1
- ProteinModelPortal:   Q87AR8
- STRING:   Q87AR8
- GeneID:   1143096
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1754
- eggNOG:   COG1496
- HOGENOM:   HBG751647
- OMA:   PQAFEVG
- ProtClustDB:   CLSK446130
- BioCyc:   XFAS183190:PD_1754-MONOMER
- InterPro:   IPR003730
- InterPro:   IPR011324
- Gene3D:   G3DSA:3.60.140.10
- TIGRFAMs:   TIGR00726

Pfam domain/function: PF02578 Cu-oxidase_4; SSF64438 Cytotoxic_necrot_fac-like_cat

EC number: NA

Molecular weight: Translated: 27664; Mature: 27533

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFPSWVLVADWPPPPGVMALSTLRDGPGVSVAPFDRLNLGNCSGVAGDAPVCVERNRS
CCCCCCEEEEECCCCCCCCEEHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCHH
RLVQMLGLPSVPHWLRQVHGVEVLRVDVLPQSIARVVEPTADAAVTSVAGAVLVILTADC
HHHHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LPVVLAAVDGSEIGVVHAGWRGLADDVLERTVAALRTSPECLQAWLGPAAGPQAYEVGVD
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEHHHH
VYAAFVERDSGAACAFSVTRPGHWYVDLYALARQRLMRAGLSAVSIYGGGLCTISDPQRF
HHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCEEEECCHHHH
FSHRRDRRSGRFATLAWIGC
HHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure 
GKFPSWVLVADWPPPPGVMALSTLRDGPGVSVAPFDRLNLGNCSGVAGDAPVCVERNRS
CCCCCEEEEECCCCCCCCEEHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCEECCCHH
RLVQMLGLPSVPHWLRQVHGVEVLRVDVLPQSIARVVEPTADAAVTSVAGAVLVILTADC
HHHHHHCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LPVVLAAVDGSEIGVVHAGWRGLADDVLERTVAALRTSPECLQAWLGPAAGPQAYEVGVD
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCEEHHHH
VYAAFVERDSGAACAFSVTRPGHWYVDLYALARQRLMRAGLSAVSIYGGGLCTISDPQRF
HHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCEEEECCHHHH
FSHRRDRRSGRFATLAWIGC
HHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12533478