| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199604
Identifier: 28199604
GI number: 28199604
Start: 2017141
End: 2017425
Strand: Reverse
Name: 28199604
Synonym: PD1729
Alternate gene names: NA
Gene position: 2017425-2017141 (Counterclockwise)
Preceding gene: 28199607
Following gene: 28199586
Centisome position: 80.06
GC content: 50.88
Gene sequence:
>285_bases GTGACATCTGTAGCGTTCGATACGCTTAAATTTGCGAACCGGCTGAAAACGGCAGGGGTTCCTGCGGCGCACGCAGAGGC TGAAGCCGAAGCCTTGGCCGAAGTGCTGGAAACGAATTTGCAAGACCTTGCGACAAAGCAAGATTTGCGGGAGCTGGAGT TAAAGCTCGAATCAAAAATAGATAAAGGGTTCACTGAAGTTAAAGGCGAAATGCTCCTACTCAAGTGGATGCTAGGCGTG CTCGTGGCGGGCGTTGCTGCACTGATCATCAAAGCGTTTTTCTGA
Upstream 100 bases:
>100_bases AGGGGCGCAGGTTCATGCCAACGCTCCGTGCAGCACTTCAGGATGGGTGGGAGGCACGCTGCTATACTCGCCACCACATG GAGCTAAAGCGGGGGACTGT
Downstream 100 bases:
>100_bases GTCACGCCAGCACCTCATCCACGCCTTTTAAGGAATCGACCACGACCACGCGCTGGCCCATGCCGCGCATGCGCTCATGC TCACGGACTTGATGCGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLETNLQDLATKQDLRELELKLESKIDKGFTEVKGEMLLLKWMLGV LVAGVAALIIKAFF
Sequences:
>Translated_94_residues MTSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLETNLQDLATKQDLRELELKLESKIDKGFTEVKGEMLLLKWMLGV LVAGVAALIIKAFF >Mature_93_residues TSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLETNLQDLATKQDLRELELKLESKIDKGFTEVKGEMLLLKWMLGVL VAGVAALIIKAFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10246; Mature: 10115
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLETNLQDLATKQDLRELELKLESKI CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKGFTEVKGEMLLLKWMLGVLVAGVAALIIKAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TSVAFDTLKFANRLKTAGVPAAHAEAEAEALAEVLETNLQDLATKQDLRELELKLESKI CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKGFTEVKGEMLLLKWMLGVLVAGVAALIIKAFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA