| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199550
Identifier: 28199550
GI number: 28199550
Start: 1943443
End: 1943667
Strand: Reverse
Name: 28199550
Synonym: PD1673
Alternate gene names: NA
Gene position: 1943667-1943443 (Counterclockwise)
Preceding gene: 28199551
Following gene: 28199549
Centisome position: 77.14
GC content: 51.11
Gene sequence:
>225_bases ATGCCGCGCGTGTACATTTGCATCTGTAACGCTGTCACTGATGATCATATTTATGAGGTTGCTGCCAGTTGTGCCGATCT TGCCGAGCTGACCATGCGTACTGGCTGTGGTTCCAATTGCGGCTCTTGCTTGAATGCGGCTGCTGAGCTTCTCGTTAAAG CGCGTGCCGCTTGTGTTATGCCGCAATCAGCGTTGCTTAATTTGGGAACGATGTGCAACAGGTAA
Upstream 100 bases:
>100_bases TAAGCGGATAGGATATTAGTAACGATTAATTTTTGTAATTGACATTCATTCTCATCTTGTGGTTGAATGGTTATGTCCCA CTTAGGGATGCCACTACCTT
Downstream 100 bases:
>100_bases TCGTAATGAGCACGATTTTCGTTCCTTCATCGGTAGATCAAGGCAGCTACAGTACCTAGAATTTTCTACCGGAGATGTTG TATGAAGGGAGACCCTAAGG
Product: bacterioferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MPRVYICICNAVTDDHIYEVAASCADLAELTMRTGCGSNCGSCLNAAAELLVKARAACVMPQSALLNLGTMCNR
Sequences:
>Translated_74_residues MPRVYICICNAVTDDHIYEVAASCADLAELTMRTGCGSNCGSCLNAAAELLVKARAACVMPQSALLNLGTMCNR >Mature_73_residues PRVYICICNAVTDDHIYEVAASCADLAELTMRTGCGSNCGSCLNAAAELLVKARAACVMPQSALLNLGTMCNR
Specific function: Unknown
COG id: COG2906
COG function: function code P; Bacterioferritin-associated ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7784; Mature: 7653
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 16.2 %Cys+Met (Translated Protein) 11.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 15.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVYICICNAVTDDHIYEVAASCADLAELTMRTGCGSNCGSCLNAAAELLVKARAACVM CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC PQSALLNLGTMCNR CHHHHHHHHHHCCC >Mature Secondary Structure PRVYICICNAVTDDHIYEVAASCADLAELTMRTGCGSNCGSCLNAAAELLVKARAACVM CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC PQSALLNLGTMCNR CHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA