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The map label for this gene is dnaJ [H]

Identifier: 28199165

GI number: 28199165

Start: 1493204

End: 1494085

Strand: Reverse

Name: dnaJ [H]

Synonym: PD1279

Alternate gene names: 28199165

Gene position: 1494085-1493204 (Counterclockwise)

Preceding gene: 28199166

Following gene: 77747685

Centisome position: 59.29

GC content: 54.99

Gene sequence:

>882_bases
ATGCAATTCAAGGACTATTACGCGACTTTAGGTGTTGAACCGAGTGCGGGTGAGGCTGAGATCAAGACCGCTTACCGTCG
GCTAGCGCGCAAATATCATCCTGACGTCAGTCAGGAGCTGGGGGCGGAGGAGAGATTCAAGGCCGTCAACGAGGCTTATG
AGGCATTACGCGATCCGAACAAGCGTGCGGCTTATGACCAGCTCCGTGCACAAGGGTACCGGCCTGGAGATGAATTCCAT
GCTCCTCCTAATTTTGGTGGTGAGCATGGTTTTAACTTTGAAGAGGTGTTTGGCAATGCGTCGGGGGGGCATTTCAGCGA
TTTCTTTGAGAGCTTATTTGCTGGAGCCCGTGCTGGTGGTCGTCATGCAGGTCCAGGGGGTGGCGCCAAATCGCAACACG
GTGATACGCGTTCCAAGTTGACTGTGCCACTGGAAGCCATTTACAGCGGGGGAAGTGTGCGGGTCACGGTCAATGGGCGT
CAGCTTGATGTGCGTGTGCCTAAAGGTATCCAACCTGGCAAGGTGATTCGGTTGAACGGACAGGGGAGCTACGCTCGTCA
TCTCTTGTTAGAGATCGAATATGCTCCGCATCCGCAATTTGAAGTTGATGGGCACAATATTCTGCACACTGTGCAAGTGA
CGCCATGGCAGGCCGCATTGGGGACTTCGATCAGCGTGCCGACTCTCGGTGGATCTGTGGAGCTGAAGGTGCCACCTGAT
TCCGATGCGGGACGCAAGTTGCGTCTGCGCGGTCGTGGTTTGCCTGGTCCTCCGCCAGGAGACCAGATCGTTGAGTTGGA
AATCACTGCTCCTTTAGCTACAAACGAGACACAGCGCAAGGCATATCGGGCGCTTGCCAAAGCGTTTGGCGAGAAGGTTT
GA

Upstream 100 bases:

>100_bases
TTGGTCGCTGTGATATTGGGTCAGCGCGCGTTTCGGCCAGATTCGGCTGGCCCGTGGCTTTGATGCTGCGGGCTTTTCCT
TGTGTAAGAGGTGACGACGG

Downstream 100 bases:

>100_bases
ACATGCCATCTGTGGGTCTGTTCGAATGAGGGGCACTGAACAAGAGGCCTCGGGTTATTTCAGGGGTTTTTTTAACGATC
ATTGGAGAATAGTTCCCTAG

Product: DnaJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDVSQELGAEERFKAVNEAYEALRDPNKRAAYDQLRAQGYRPGDEFH
APPNFGGEHGFNFEEVFGNASGGHFSDFFESLFAGARAGGRHAGPGGGAKSQHGDTRSKLTVPLEAIYSGGSVRVTVNGR
QLDVRVPKGIQPGKVIRLNGQGSYARHLLLEIEYAPHPQFEVDGHNILHTVQVTPWQAALGTSISVPTLGGSVELKVPPD
SDAGRKLRLRGRGLPGPPPGDQIVELEITAPLATNETQRKAYRALAKAFGEKV

Sequences:

>Translated_293_residues
MQFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDVSQELGAEERFKAVNEAYEALRDPNKRAAYDQLRAQGYRPGDEFH
APPNFGGEHGFNFEEVFGNASGGHFSDFFESLFAGARAGGRHAGPGGGAKSQHGDTRSKLTVPLEAIYSGGSVRVTVNGR
QLDVRVPKGIQPGKVIRLNGQGSYARHLLLEIEYAPHPQFEVDGHNILHTVQVTPWQAALGTSISVPTLGGSVELKVPPD
SDAGRKLRLRGRGLPGPPPGDQIVELEITAPLATNETQRKAYRALAKAFGEKV
>Mature_293_residues
MQFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDVSQELGAEERFKAVNEAYEALRDPNKRAAYDQLRAQGYRPGDEFH
APPNFGGEHGFNFEEVFGNASGGHFSDFFESLFAGARAGGRHAGPGGGAKSQHGDTRSKLTVPLEAIYSGGSVRVTVNGR
QLDVRVPKGIQPGKVIRLNGQGSYARHLLLEIEYAPHPQFEVDGHNILHTVQVTPWQAALGTSISVPTLGGSVELKVPPD
SDAGRKLRLRGRGLPGPPPGDQIVELEITAPLATNETQRKAYRALAKAFGEKV

Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=334, Percent_Identity=31.7365269461078, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI201862587, Length=335, Percent_Identity=30.7462686567164, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI201862518, Length=335, Percent_Identity=30.7462686567164, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI56549115, Length=335, Percent_Identity=30.7462686567164, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI5453690, Length=331, Percent_Identity=28.7009063444109, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI39204547, Length=316, Percent_Identity=26.5822784810127, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI205360838, Length=335, Percent_Identity=25.6716417910448, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI205360840, Length=335, Percent_Identity=25.6716417910448, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI194328760, Length=153, Percent_Identity=37.9084967320261, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI194328758, Length=153, Percent_Identity=37.9084967320261, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI194306642, Length=110, Percent_Identity=42.7272727272727, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI194306640, Length=110, Percent_Identity=42.7272727272727, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI9558755, Length=95, Percent_Identity=41.0526315789474, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4504511, Length=152, Percent_Identity=34.2105263157895, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI23503241, Length=104, Percent_Identity=39.4230769230769, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI72534740, Length=131, Percent_Identity=35.1145038167939, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI56687498, Length=63, Percent_Identity=47.6190476190476, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI7706495, Length=286, Percent_Identity=24.1258741258741, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI22749377, Length=113, Percent_Identity=38.0530973451327, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI5031741, Length=68, Percent_Identity=48.5294117647059, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787235, Length=310, Percent_Identity=37.4193548387097, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1786197, Length=140, Percent_Identity=35, Blast_Score=92, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17534355, Length=324, Percent_Identity=29.320987654321, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17554644, Length=63, Percent_Identity=58.7301587301587, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17553096, Length=63, Percent_Identity=49.2063492063492, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17553098, Length=63, Percent_Identity=49.2063492063492, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212645553, Length=316, Percent_Identity=23.7341772151899, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17507263, Length=62, Percent_Identity=51.6129032258064, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538236, Length=116, Percent_Identity=36.2068965517241, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323813, Length=121, Percent_Identity=38.8429752066116, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6324265, Length=184, Percent_Identity=32.6086956521739, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6323870, Length=74, Percent_Identity=47.2972972972973, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=61, Percent_Identity=54.0983606557377, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322388, Length=107, Percent_Identity=39.2523364485981, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726398, Length=354, Percent_Identity=27.9661016949153, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24658562, Length=317, Percent_Identity=29.9684542586751, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24658555, Length=317, Percent_Identity=29.9684542586751, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI18858081, Length=310, Percent_Identity=30, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646562, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646560, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646558, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646556, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357547, Length=153, Percent_Identity=32.6797385620915, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24668492, Length=75, Percent_Identity=45.3333333333333, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45549272, Length=64, Percent_Identity=54.6875, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45552813, Length=64, Percent_Identity=54.6875, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45552811, Length=64, Percent_Identity=54.6875, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI20129487, Length=161, Percent_Identity=31.055900621118, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24584014, Length=161, Percent_Identity=31.055900621118, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 31794; Mature: 31794

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDVSQELGAEERFKAVNEAYEALRDPN
CCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCC
KRAAYDQLRAQGYRPGDEFHAPPNFGGEHGFNFEEVFGNASGGHFSDFFESLFAGARAGG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCC
RHAGPGGGAKSQHGDTRSKLTVPLEAIYSGGSVRVTVNGRQLDVRVPKGIQPGKVIRLNG
CCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEEEECC
QGSYARHLLLEIEYAPHPQFEVDGHNILHTVQVTPWQAALGTSISVPTLGGSVELKVPPD
CCCCEEEEEEEEEECCCCCEEECCCCEEEEEEECCHHHHHCCCCCCCCCCCEEEEEECCC
SDAGRKLRLRGRGLPGPPPGDQIVELEITAPLATNETQRKAYRALAKAFGEKV
CCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDVSQELGAEERFKAVNEAYEALRDPN
CCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCC
KRAAYDQLRAQGYRPGDEFHAPPNFGGEHGFNFEEVFGNASGGHFSDFFESLFAGARAGG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCC
RHAGPGGGAKSQHGDTRSKLTVPLEAIYSGGSVRVTVNGRQLDVRVPKGIQPGKVIRLNG
CCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEEEECC
QGSYARHLLLEIEYAPHPQFEVDGHNILHTVQVTPWQAALGTSISVPTLGGSVELKVPPD
CCCCEEEEEEEEEECCCCCEEECCCCEEEEEEECCHHHHHCCCCCCCCCCCEEEEEECCC
SDAGRKLRLRGRGLPGPPPGDQIVELEITAPLATNETQRKAYRALAKAFGEKV
CCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA